Detailed information on CNT30229743


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506309Ananas comosusNicotiana attenuata48.3122.1888.6114reverse complement
CNT3045660Ananas comosusPrunus dulcis31.7817.989.3375reverse complement
CNT30635928Ananas comosusCapsicum annuum25.4213.5788.3360forward
CNT30585847Ananas comosusMusa acuminata53.8119.4595.28127forward
CNT30553747Ananas comosusOryza glaberrima47.037.887.39111reverse complement
CNT30344054Ananas comosusEragrostis tef42.3718.2887100reverse complement
CNT30705533Ananas comosusPrunus avium5013.7287.29118reverse complement
CNT30119130Ananas comosusCitrus clementina49.5812.1787.18117forward
CNT30147990Ananas comosusBrachypodium distachyon28.814.4991.1868reverse complement

Expression of CNT30229743

Peptides detected in this lncRNA

>peptide 1 (77 aa)
ILIFLIILSVLMLYHTAFYDVIHRPYILESYIIDIFVLSFYHPSIYPYPFIFFFCFTTHNQIYFFLKEFQLLQPYDRS

Sequence

>CNT30229743
AAATTCTTATATTTCTAATTATCTTATCAGTATTGATGCTTTATCACACTGCCTTTTATGACGTGATTCATAGACCATACATATTGGAATCATATATCAT
TGATATTTTTGTTCTTTCTTTCTATCATCCTTCCATTTATCCATATCCCTTTATTTTTTTTTTTTGCTTTACAACCCATAATCAGATTTATTTTTTCTTG
AAAGAATTTCAGTTGCTACAACCATATGATAGATCC