Detailed information on CNT30229709


BLAST search results

BLAST vs Swiss-Prot:
sp|P23662|CYB_CHLRE, E-value = 2e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30390425Ananas comosusTriticum turgidum39.0819.6896.77186forward
CNT30592530Ananas comosusMusa acuminata23.3213.2596.4111forward
CNT30443845Ananas comosusAegilops tauschii29.228.6697.84139forward
CNT30309525Ananas comosusCamelina sativa21.2224.4697.03101forward
CNT3081844Ananas comosusBrassica juncea28.3619.3197.04135forward
CNT30689753Ananas comosusTriticum urartu39.0819.3397.85186forward
CNT30148125Ananas comosusBrachypodium distachyon38.4565.5995.63183forward

Expression of CNT30229709

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MLEHCVEQGITYVKRDIKTGAIAATHPDLSGILRRMAWIGRKYHSGRI*

>peptide 2 (33 aa)
MRRGGHRISRYIIVGMPQNIRSIKNPNSIRYFI*

Sequence

>CNT30229709
AGCCGACGTAACTAGTTGAGGTGGGTTCCAAGTTATCGAAAATGACGGATTTCCTTCTATGTCTATTTGCTTGTACATGCATATGTATATGAGCATCTAT
GGGTTTTGGTAGCATGGACTTGAGTAGAAGTCTAGATTCCTCATAAGCGCATATGTGCACGATGATTTATGCTTGAGCATTGTGTTGAGCAGGGCATAAC
ATATGTCAAGAGAGATATAAAAACTGGTGCTATTGCGGCTACACATCCCGATTTGTCAGGTATACTGCGAAGAATGGCATGGATCGGTAGGAAATACCAT
TCCGGCAGAATATGAGGCGGGGTGGGCATCGGATTAGCAGGTATATAATTGTCGGGATGCCCCAAAACATTAGGAGCATAAAAAATCCAAATTCTATACG
TTATTTTATTTAGTGATAGAGATGCTATTAGCATGAAGTTGAGTTCTTATTCACAGATGGAAACTAATGCAAGCCA