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Detailed information on CNT30229549


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-158

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30586586Ananas comosusMusa acuminata73.4448.886.89694forward
CNT30359105Ananas comosusLactuca sativa70.1645.0786.12663forward
CNT30370375Ananas comosusOryza glumipatula72.9172.2285.34689forward

Expression of CNT30229549

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPLRRRTRWSVDSFWML*

>peptide 2 (31 aa)
KQIQLKHIYYYHKSAFLTHYYEFTVLKHINT*

>peptide 3 (35 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI

>peptide 4 (37 aa)
MVSELSTSRVMVLPVRVFTKICMPPLSLNTRWRVDSF*

Sequence

>CNT30229549
CAAAGCAAATACAGCTAAAACACATATATTATTACCATAAAAGCGCTTTCTTAACCCATTACTACGAGTTCACCGTTCTCAAACACATAAACACATAAAC
AGCTAGGTTCATGCGTACACCAACCAAATACATATTGAAATACGACGAAAGCAAGCTATACTACTGCCTGCTCTAACACTTGACGCATAGACTCGACGAC
ATCGCAAACACCAAAGAAACTTCATAAGACAGGAGGAGCTAAGCCACAGTCAGCTCACTGGCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCC
TTTTGAATGTTATAGTCGGCAAGGGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAA
TCTTCGCTTTCACGTTATCAATGGTGTCCGAGCTTTCAACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATGCCCCCCCTCAG
CCTCAACACGAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGG
TCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTT
TCACAAAAATCTGCATCCCTCCCCTTAGGCGAAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTG
CTTGCCGGCGAAGATAAGCCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCA
AGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATC