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Detailed information on CNT30229481


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-157

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30242438Ananas comosusAvena sativa64.7674.0989.11689forward
CNT30652979Ananas comosusRosa chinensis64.2962.4786.4684forward

Expression of CNT30229481

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPLRRRTRWSVDSFWML*

>peptide 2 (44 aa)
REFQNQPEQQKIIIINSLCACPHKVTINTNQVTAKVVILQSKYS*

>peptide 3 (35 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI

Sequence

>CNT30229481
AGAGAGAGTTTCAGAATCAACCAGAACAACAAAAGATAATTATAATAAATAGCCTTTGCGCATGCCCCCATAAAGTAACTATTAATACAAACCAAGTCAC
AGCAAAGGTAGTTATACTCCAAAGCAAATACAGCTAAAACACATATATTATTACCATAAAAGCGCTTTCTTAACCCATTACTACGAGTTCACCGTTCTCA
AACACATAAACACATAAACAGCTAGGTTCATGCGTACACCAACCAAATACATATTGAAATACGACGAAAGCAAGCTATACTACTGCCTGCTCTAACACTT
GACGCATAGACTCGACGACATCGCAAACACCAAAGAAACTTCATAAGACAGGAGGAGCTAAGCCACAGTCAGCTCACTGGCCACCACGGAGGCGGAGGAC
GAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAATCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA
ATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATAGTATCGGAGCTCTCAACCTCCAAGGTGATCGTCTTGCCGGTGAGGGTCTTGACAAAGA
TTTGCATCCCGCCCCTCAAACGAAGAACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCTGCAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGC
AAAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGGGTGATG
GTCTTGCCGGTGAGGGTTTTCACAAAAATCTGCATCCCTCCCCTTAGGCGAAGAACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGG
TGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGCCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGT
GTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATC