Detailed information on CNT30229287


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30540812Ananas comosusBrassica napus18.5322.1890.5753forward
CNT30131453Ananas comosusLolium perenne30.7723.4782.9588forward

Expression of CNT30229287

Peptides detected in this lncRNA

>peptide 1 (64 aa)
PAAFGRERQHPSPWALMYAMRRWSSSLVHAPLFVCAFSQHGDLPMVLYREKARERWLCVILLYL*

>peptide 2 (39 aa)
MLLCLCAPFHNMETSPWFSIERKRERDGFVLSCYICRLV*

>peptide 3 (48 aa)
TCGFRKRAPTPLSMGFDVCYEALVLFLSPCSFVCVRLFTTWRPPHGSL*

Sequence

>CNT30229287
TACCTGCGGCTTTCGGAAGAGAGCGCCAACACCCCTCTCCATGGGCTTTGATGTATGCTATGAGGCGTTGGTCCTCTTCCTTAGTCCATGCTCCTTTGTT
TGTGTGCGCCTTTTCACAACATGGAGACCTCCCCATGGTTCTCTATAGAGAGAAAGCGAGAGAGAGATGGCTTTGTGTTATCTTGTTATATTTGTAGGTT
GGTATAAGAGATAGATGGAGAGATATATAGAGAGATATATATAGAGAGATATATAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAG