Detailed information on CNT30229236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730606Ananas comosusCorchorus capsularis24.4112.3594.5273forward
CNT3045035Ananas comosusPrunus dulcis26.7611.7691.2580reverse complement

Expression of CNT30229236

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSQLDIFWHYHHKEEIPDFCYFVSSRQIESS

>peptide 2 (33 aa)
SLRLNHRGSSMNLRFQLIHRVSTREFLSIVKQE*

Sequence

>CNT30229236
TAGCTTGAGGCTAAATCATCGTGGTTCTAGTATGAATCTGAGGTTTCAATTGATTCATAGGGTCTCAACAAGAGAATTCCTATCAATAGTAAAACAAGAG
TAAATCCGCAGTACGCACAAAAAAAAAACAATAAATCAAATAACAAATAAAAAATAGGGAAGAGAAGGTTCAAGAGGCCTGTAACGATCAACATAAAGAA
AGACAGATGAGCCAACTTGATATTTTTTGGCATTATCATCACAAAGAAGAGATTCCGGATTTTTGTTACTTCGTATCTTCGAGGCAAATCGAATCAAGC