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Detailed information on CNT30229183


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30445199Ananas comosusSaccharum spontaneum18.9725.283.12154reverse complement

Expression of CNT30229183

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MENKGSFLLKFFGVNRVIIISMLNIKIHTK*

Sequence

>CNT30229183
AAGGAGGATATGAACATGATTATTCAATCACCATGTTTAGAAATGATGACTAGATCACCATCTTCAACTTAACATGGCTGACGTGGCTATTTATGCAAAT
ATAAATTTGCTCAAGCCATTTGTGAAAAAAAAGATTTGAAGGAGCTAAATGCAAAAAACCCTATAGGTTTATCAATAATAATCTTAAATATTTATTATTT
ATTCAGAAACCCACATGGAAAACAAAGGGTCATTTCTATTGAAGTTTTTTGGAGTCAATCGTGTAATAATAATTTCGATGCTAAACATAAAAATACACAC
TAAATAATCTGTTTTTAACCTCAATACAACTAAATCCGCGAAGGATTATATATAAACATATAATCAAGACACGAAGAATCACATGCCAAATACCAAAAAA
TACAACTCTGAAAGAAGGATACCAAAAAGCTGGCGCAGAAATATCACATAACACATGGTTTTGAATGAACAGAAACCAGTAATAAGAAGCTAAAATAGGA
TGTGAAAATTTAGGAATATAAGAAGGTCTCTCGCGCGCAATCCTTGTATTTGTATCTCTACTGTATCTTTATCACTTCACAGTTTTTTGTATCCGAGCAT
AGGACAGCGTACCTCGCCGTCGTCGTCATCATCACCCTTCTTGAGGCGCGTAGTTCCACCCTCTCGGCTGATGGGCAACTTCATGTTCCCGAAAGGAGTG
TCCACATCAATATTTCCTTTTATGGTATAACCAGTACCCCTCCCCCTAAGCATATCCCAAAGAGCGGATCCGAAGTCCTTCGGCTTGAAAGAAATCGGAA
GCTGCATTGAAG