Detailed information on CNT30229173


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6AVI0|RSLE2_ORYSJ, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30249176Ananas comosusAvena sativa12.1655.8582.15353forward
CNT30346251Ananas comosusEragrostis tef12.1658.2581.87353forward
CNT30596291Ananas comosusOryza meridionalis12.1686.181.3353forward
CNT30580115Ananas comosusEchinochloa crusgalli21.0124.0479.67610forward
CNT30557998Ananas comosusPanicum hallii24.628.8678.43714forward

Expression of CNT30229173

Peptides detected in this lncRNA

>peptide 1 (98 aa)
MAFDDGGGSTIVGKYWSQSFAQKSACAVSGGNELWYSSSTLLPVPDPNIEEPVPTMDTGMAKMSRAILESVGYLIVFSFHQFNISNSWILGTRDSSRY*

>peptide 2 (80 aa)
MCLLRWLVPAIFEPELYANVCLHSLQQARVHPPATASTVKCSHTIDFFRRRLEVGGVTSASALLTGSESLASPMLIEGKS*

>peptide 3 (75 aa)
MHDDHFREIIAATILIERSICISRISIASFGWQISGVPIIFCTRSEGKMLPLLVFEFGTGAQGDVPLKMAGACNL*

>peptide 4 (29 aa)
MKVCSYLSYHKLSVFDMPERNSSHENIPS*

>peptide 5 (29 aa)
MFFDELLQSFCYIQLQIVHKTTLVKPSKG*

>peptide 6 (38 aa)
MGITTHNEQLTFKHERILVGEVISEICTVDVMRGAVIV*

>peptide 7 (36 aa)
MSKSRSPSPVEIGVEGSRLLFSLPLAVKLLGSPCSA*

>peptide 8 (36 aa)
MSCEEQSLSKVIVNSLSFIFQSKRLTPIASLSAFSE*

>peptide 9 (30 aa)
MTAFAESYKSFKNTQTTSTFFQSSGDGASL*

>peptide 10 (60 aa)
MRRRYQHEVEHSPVQLPVRVDELPRQRNIPKSLIGHPQAHSKADPPRHTTAKYLQQIHLL*

>peptide 11 (48 aa)
MHLYSDLTYYRVFTEGRIGQFYLDLPRFMEEYIGCRLCRCHDSIRRII*

>peptide 12 (39 aa)
MISRDSVFELGISLCKAISANLSSRAREAFTNFMLSRIL*

>peptide 13 (38 aa)
MNTIIDHLNILRGICTINLGEAELNKLHLETRVHHNSN*

Sequence

>CNT30229173
GGGTGGATAAACACAAACATTATGCTACAGGTACGGTGATCTCAAACATGGCAGAACTGTAAAAGAAGACTTGCAGATTCAAAGATAGCTTGCTCCACAA
TTTCACACGCAGTCGAAAGAAGAAAGGGAACCACATATCGGCCTAGGCGTTAAAGACAATATAAAGTAAAAAGCACGGAAAAAGACTAAAGTACACACCT
AATACACTACCTAAAGAAGTAAAGATGAAGGTTTGTTCCTATCTAAGTTATCATAAATTATCGGTCTTTGACATGCCAGAAAGAAACAGCTCCCATGAAA
ATATACCTAGCTAGATTTCCATCTTGACAATGGCATTTGATGACGGTGGCGGCTCCACCATAGTGGGCAAGTATTGGAGCCAGTCTTTTGCGCAGAAAAG
CGCCTGTGCTGTTTCAGGAGGCAACGAGCTGTGGTACTCATCAAGCACTCTGCTTCCTGTACCCGACCCGAATATCGAGGAGCCCGTGCCGACCATGGAC
ACTGGAATGGCCAAGATGTCGCGAGCCATCTTAGAGAGTGTCGGATATTTGATAGTATTCAGCTTCCACCAGTTCAATATATCAAATTCTTGGATTCTTG
GGACGAGGGACTCCTCCAGGTACTGATCTAGTTCTGACTTTGTTGAGTGGTTCACGGACATCTCAGAAAGGTAGATGTCAAAGTCAAGAAGCCCATCGCC
AGTTGAAATTGGTGTTGAGGGCAGCCGGTTGTTGTTCTCATTGCCATTGGCGGTGAAGTTGCTAGGCTCCCCTTGTTCTGCATAAGCTGGAGTTAATGGC
AACGGCTGGGTGGTGTATTCCTGATAGAGCTCATGAACACTATCATCGACCACCTTAACATACTTCGCGGCATCTGCACCATAAATCTTGGAGAAGCTGA
ACTCAATAAGCTTCATCTTGAAACGAGGGTCCATCACAACAGCAATTGACAAGACAAGGCTGCAATCCTTCCAATATTTGTCAAACTTCTCATGCATCTC
TATAGCGATCTCACTTACTACAGGGTCTTCACTGAGGGTCGCATTGGTCAGTTCTACCTGGATCTTCCACGCTTCATGGAAGAATATATTGGCTGTCGGC
TCTGCCGCTGCCATGACAGCATTCGCAGAATCATATAAAAGCTTCAAGAACACACAAACGACCTCCACCTTCTTCCAGTCATCAGGTGATGGTGCTTCAT
TGTAGTTATCATCGCACGTTTCCAAATCAGTGAATACTTGCTTGTATTCTGAGGCGGCGAGCAGCATGAGGTAAGTCGTGTTCCACTGTGTCATGATATC
AAGAGATAGCGTCTTCGAGCTCGGAATCTCCCTTTGTAAGGCAATCTCAGCAAACCTCTCTTCACGAGCCAGAGAAGCTTTTACAAACTTTATGCTTTCA
CGGATATTGTAGATAATACCGTGAATTGAGGCAATCACATCATGGGCAACAACATTCAGTAGATGGGCATAACAACGCACAACGAACAACTGACCTTTAA
GCATGAGCGCATTCTTGTTGGAGAGGTGATCTCTGAGATTTGCACTGTAGATGTCATGCGAGGAGCAGTCATTGTCTAAAGTGATTGTGAATAGCCTGTC
CTTCATATTCCAATCTAAGAGGCTGACCCCAATAGCTTCGCTAAGCGCGTTTTCTGAATGAGGAGAAGATACCAGCATGAAGTTGAGCATTCTCCTGTGC
AGCTTCCAGTCCGTGTCGATGAACTGCCCCGCCAGCGAAATATACCCAAGAGTTTGATTGGTCATCCACAAGCCCACAGTAAGGCTGATCCGCCCAGGCA
TACAACTGCTAAATACTTGCAACAGATTCACCTTCTCTGACTGATAAACAGTTAAAACCTCTTGTTGGATGGTATTGACATCTACCATCCTGAACCGAGG
CTGCAGGCTCTCGACAAAAGAGATGAAAGCAGGCTGTTCGACGATGTGAAGAGGGTAGTCATGCACGATGATCATTTTCGCGAGATTATTGCAGCTACGA
TCCTGATCGAACGCAGCATTTGCATATCCAGAATATCTATAGCGTCTTTTGGTTGGCAGATCAGTGGTGTCCCCATCATTTTTTGTACCAGAAGTGAGGG
CAAGATGCTTCCTCTCTTGGTCTTTGAGTTTGGGACAGGAGCCCAAGGTGATGTGCCTCTTAAGATGGCTGGTGCCTGCAATCTTTGAACCAGAACTGTA
CGCAAATGTTTGCTTGCACAGTTTGCAACAAGCACGTGTGCACCCTCCGGCCACAGCTTCAACAGTGAAGTGCTCCCATACCATCGACTTCTTCCGTCGT
CGCTTGGAAGTCGGTGGGGTAACTTCAGCTTCAGCATTGTTGACTGGCTCAGAGTCGCTAGCGTCCCCCATGCTCATTGAAGGGAAAAGTTAACTGATAG
GGAAGATCCGTGAGTTGCTGATGTTCTTCGACGAATTACTCCAATCCTTCTGTTATATCCAGCTGCAAATTGTGCACAAAACAACTCTTGTAAAACCTTC
CAAAGGGTAAGGCAAAGTCAGGCTAAAAGAAAAGATTGTTTAAAATGATAATACAATGCACTGTACTTTTAGTTCCTTTATCTCCTTTCTTCTGTAAGCT
ATGCATCTACTAAAAGCACGAACATCTCAATCATTGAATCTCACAAAAAATGCAATTTAACTCTTAAACTACCAGTGTTCATGCTATTAGTAAATAAATA
AATATTCTCAGCCACCTAGTCTTCTCATTCCGAAAGTTAGATACGTATGAAATACAGCTTTTAGCATCCTAGGTTTTCCCAGTCCAAACATCCAACTATT
TAAAAAATGACAAATACAACATATGAAAAGGTGCTTTAATTTTCTCAGCGAAGGAAAATCATGTTTGTCAGAGAGATATGGAATGGGCAAGCGTGAAACA
AAG