Detailed information on CNT30228891


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618173Ananas comosusSesamum indicum22.1118.5485.03147forward
CNT30727927Ananas comosusCorchorus capsularis44.5145.0585.47296forward
CNT30712730Ananas comosusGlycine max17.1422.2790.35114forward
CNT30720142Ananas comosusTriticum spelta27.8251.6885.41185forward
CNT30340361Ananas comosusEragrostis tef40.1551.0584.27267forward
CNT30104166Ananas comosusOryza rufipogon46.1755.7284.04307forward
CNT30578254Ananas comosusOryza barthii38.591.7685.94256forward

Expression of CNT30228891

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MVGLLSRDDRSIGGKHEVNSRIRDQVGLELSDINIQGTVKPQ*

Sequence

>CNT30228891
AGCCTGAGCTGTCAAAATATAGCATAGAGGAACAAAGATGACAAACAGTAAACTCCATAACAAGAAACAAACCATCCATAGAGAGCACACTGGCAAGGGC
ACAGCAACATTTTAGAGATAAGGTTCACGGAGGACAAACTTGTAAGGGGCATGGCATCTAAAGATGCGGGAGAGGTTCATCAAAGATAACACGACAGAAC
ATCAACAAGCAACCAACAACATAAGCAGATAATGCAGACACTGCTGAAAAGTACACAACAACAGACCGAGAGATGGAAAGATAAAACATCAGCTACTTAG
TAGTCGTCACCTTCATCACCCTCTTCTCCCTCATTAGACTCTGCGCCAACCTCCTCATAGTCCTTCTCGAGCGCAGCAAGGTCCTCACGGGCCTCGGAGA
ACTCCCCTTCCTCCATGCCCTCACCCACATACCAGTGAACAAAGGCACTGTTGGTAATTTCAGCAACAGAGAGTTGCTCATGGTAGGCCTTCTCAGCAGA
GATGACAGGAGCATAGGAGGAAAGCATGAAGTGAATTCTAGGATAAGGGACCAGGTTGGTCTGGAACTCAGTGACATCAACATTCAGGGCACCGTCAAAC
CTCAATGAAGCCGTCAAAGATGAAATCACCTGGAAAAATAAGAGATGAAATTTTAGCAACCTACA