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Detailed information on CNT30228804


BLAST search results

BLAST vs Swiss-Prot:
sp|O22259|ERF71_ARATH, E-value = 7e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30708948Ananas comosusGlycine max11.0926.0186.62142forward
CNT30563605Ananas comosusActinidia chinensis11.0930.0288.03142forward

Expression of CNT30228804

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MCISIFVFLVPLHHPISSRSSSSYSKPCIHKHHKST*

Sequence

>CNT30228804
CTGAACTGTTTGAATAAAGATTAATGATCCATTTAGTGAAATATCTGTAACATAGTGACAATATTTCTTTGTAAAGAAGCTAAAGGGCAAAAAAAACATC
GGTCAAAAAGCACTCATCTTCTTGTATACTATGACTCTCTGTTTTTTGTTCTTCTTTTTTTGCAACACCTGATTATAAGGTATGCATTTAACTTAACAAC
AATTCCATCAAATATTTGATCATTTCAAACCCCAAAAAAGAAATTAGCACTAATCATAAAGAGCTAATGTGCATCTCAATCTTTGTGTTTCTTGTGCCTC
TACACCATCCAATCTCTTCGCGATCGAGTTCATCATACTCAAAACCATGCATACATAAACACCATAAAAGTACTTAAAAGCAATATAATAATTACACAGC
TACACAACAATTACAACTACACAATAGATTTAAAACATCTCCTTACTCGCTGGTGATGCTGAGGCAAAAACATCCAGCAAAAACCAGGAGGAGGTGACCC
CAATATAATAATTAATTACATACCAAGCCCACTATTAAGAAAGGGGGGAAAAAAAAAAAAAAAACCTAAAAGAGGACTCTGATTCTTCTTCTTCGACCTA
AAAGAGCTCTCCGCAAACGTCTAAAACCCCATTTGCAGAAGAAGCCCATAACCACTAATTAAGAACTACACCATACTACTACACCAAATACAATTATATT
CCCACAAGACGAAGAAAAAAAAAAGAAAAAAAATATACTAATTTTGGGATAAAATGGAGTCCCAGTCGATCTCGTAGGAGGGATACTTGCGGAGGAAGAA
GCTCTCGGACTCGTCCCATGGCGCCTCGGTGAAGTCCAAGGTCTCCATCTCCGACACCGGCGACGACGAGTCCTCGGCCTCCCCGTCCGACGACGACGAG
CTCTCCTCCGCCGCCGCCGAGGCCGGGGCGGAGGAGCTCGGCGGAGCTGCTGCGGCGGCGGCTGCGCTCCGGCCGGTCTTGGGGGCGGGGGCGGAGGAGG
AGGTGGCGGTGGCGGAGGTCGGGGAAGTTGAGGCGGGCGAAGTCGCCGCGGAGGCGGAACGCGGCCTTGTCGTAGGCGAGCGCGGCCTCCTCGGCGGTGT
CGAAGGTGCCGAGCCAGAGCCGCGTCCGGTTCTTCGGGAGCCGGATCTCCGCCACCCACTTCCCCCAGTGCCGCTGCCGCACCCCGCGGTACAGCTTCGT
CGCCTTCCCCCCCGGCGCCGCCGCCGCCGCGGCAGCCCCGTGCTTCATGGACTGCGCCCGCGGGCCGAGGTAGCCAGGGC