Detailed information on CNT30227829


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06GY7|PSAI_DRIGR, E-value = 1e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Ananas comosusOryza sativa35.963.6686.98169forward
CNT30678052Ananas comosusSetaria viridis207.2590.4394forward
CNT30616037Ananas comosusSesamum indicum23.194.9291.74109forward
CNT3047368Ananas comosusPrunus dulcis23.8315.290.18112forward
CNT30554212Ananas comosusOryza glaberrima35.964.4886.98169forward
CNT3018021Ananas comosusZea mays202.4288.394forward
CNT30354656Ananas comosusLactuca sativa23.193.8289.91109forward
CNT30369217Ananas comosusOryza glumipatula35.9626.1286.98169forward
CNT30152456Ananas comosusPrunus persica22.7722.2590.65107reverse complement
CNT3058960Ananas comosusAmborella trichopoda23.195.3591.74109forward
CNT30323690Ananas comosusAsparagus officinalis28.35.2196.24133forward
CNT30150293Ananas comosusBrachypodium distachyon21.065.8887.8899reverse complement

Expression of CNT30227829

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPCIYIHAFMRISCIRMHNSSFICVWKEPLYDTVLK*

Sequence

>CNT30227829
CTAATGTGATGTGGAGTAATTGGTTAGATACATTGACTTTCTATTAAAAATATTTACTGATCCTTTTTAACCAGCTATGCCCTGCATATATATACATGCA
TTTATGCGGATATCATGTATCCGCATGCATAACAGTTCTTTCATTTGTGTGTGGAAAGAGCCACTTTATGATACAGTGTTGAAATAAATTGATAAGATTT
GGTCCCATTGGATCTAGACAATCTTATTTTTTTGGACATGAAGAGATAAAGAAGCCATTGCAATTGCCGGAAATACTAGGCCCACTAAAGGCACAAAAAT
AGAGGGTAAGTTGAGATCTGTCATAGAATGGGTGCCTCGATTTAATATTTGTATCTATATATTTGTATCTATTAGAAAGATATCTTATGATATGATAAGT
ATATCTATTATAAGTAATATTAAGTAATATTGACTATTGTATTTTATATAATATGAAGTTTGAATAATAA