Detailed information on CNT30227733


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197849Ananas comosusPisum sativum7.6420.2895.92147reverse complement
CNT30494334Ananas comosusOlea europaea5.6122.4590.74108forward
CNT30637495Ananas comosusCapsicum annuum8.3742.4884.47161forward
CNT3081767Ananas comosusBrassica juncea7.0235.6288.15135forward
CNT30679389Ananas comosusTriticum urartu14.5529.6692.14280reverse complement
CNT30481824Ananas comosusChara braunii3.3821.0490.7765reverse complement

Expression of CNT30227733

Peptides detected in this lncRNA

>peptide 1 (31 aa)
IERIGTREREDLLLPIMTRDQRFDVLFAPIP*

>peptide 2 (35 aa)
MQPVGGGGQRQGDWDQLWRSSYGLGINGFGSSVST*

>peptide 3 (63 aa)
MTVKICRPPTRDVWKNSRKCSRSEEGAKDKATGINYGAAATDWESMDSEAVSRPDQKDKSIGS*

>peptide 4 (73 aa)
MRPKRAPFFTTFGDGVKGGLHTTGAKWFMIESQRHSYHLVDPSPWPISGSLGALATTVGGVMYLFSTFNSVVN*

>peptide 5 (85 aa)
MFGKIVGNAAGRRRGPKTRRLGSTMAQQLRIGNQWIRKQCLDLTRKISQSVREVVEYLLSINRLSYLSFRRRRRCFTYHGKELIY*

Sequence

>CNT30227733
GATCGAACGAATCGGAACTAGAGAGAGAGAAGATCTCCTCCTGCCTATCATGACCCGGGACCAGAGATTCGACGTGTTGTTCGCTCCGATCCCCTAACTT
CCGGAGTGGGATGGGCATTAAATAGAGTAGTTGACTCAAGCCCTACATTCGATCCGAGGACTTTCACAATTTAGGGATGACTCGATCTGCCCCACCTGAC
TGAAGAAGCCTTCCTGGGCCTAGCAGCTAATGCTTCCGAACACGGAAAGGATCAGAAAGATTCGTATTTCATGACGGTCAAGATTTGTCGTCCTCCAACT
CGAGATGTTTGGAAAAATAGTAGGAAATGCAGCCGGTCGGAGGAGGGGGCCAAAGACAAGGCGACTGGGATCAACTATGGCGCAGCAGCTACGGATTGGG
AATCAATGGATTCGGAAGCAGTGTCTCGACCTGACCAGAAAGATAAGTCAATCGGTTCGTGAAGTAGTAGAGTACCTGTTGTCGATCAACCGGCTGTCTT
ACCTCAGTTTTCGACGTAGGAGGAGATGTTTTACCTATCACGGAAAGGAATTGATCTATTAAAAGGCTTTGCATTGCAACCGAACCGAAAATCCCTTCTT
TGAGTCACAAATCGATACCTATCCTAGGGAATTTTTCTTTCTTTCGTTCTGGAGGTTTCGAAACCAGAAGTTGAGAAGCAAAGAATAAAGAAGGCAGTTA
GCGAGCCGTAGGCGAGCGAGGAAGATAACCCTGACTTTTGTTGGGTCAACAACCCTCGTTATATCCTCGTAACGTTGAGTCTTTCAGTTGGTCTAAATAA
AAAAATGAAAATCTATTTTGATATAGAATTATCCCCCTCTTTCACTTCTTCGATAAAAAAGAAGCGGGTGTGGTAGTATTTGTTGTATTGTAGCCAGCAA
TGGGTCTGTCGGCGGCGAGGAAGTATGAAATGGAGGAATAGGCGTGGACACAACTCCCTTATCGAGAGAGACTGCGCTTAACGCTCTAACCGTCATCTGG
CGGACCCGTCATCAGACGAAGACCAGATAAGATAAAAAGCTTCATGGTCTATTCAAAGCCAATGTTCTGACCTCCTAACCTGAGGAAAATGGTTCTTTCC
TTAACCTTAACGAGGACTCTCTTATCTGTGACATAGTTGAAGGCACGTGCAAGGATACAATGGACATCCTCTTTGATCTATCTTTGAATATCATTAGAAA
AATTTATTCCGTGCCAACGAATTGAAGAGGGCATTGGAAGAAGAAGCTGACGCCAACAAAAAATGCGTCAGTGAGGAAATGCAAACCAATGATTAATTAA
GGTCTATTTATTTTCCCACGTAGAAAGTGGGTCAAACCAACGATTCTCTTCTCAAATCAAAAAAGTAATAGAGAGATCTTTTGATAGTATCACTTCTATC
AATGCAATGAAAGAACCATCCCTTCCTATTTGTTTGTCCTGTCAGATAGAAAGAAAATGAGACCAAAAAGAGCCCCCTTCTTTACCACTTTTGGGGATGG
GGTGAAGGGGGGTTTACATACAACCGGGGCAAAGTGGTTTATGATTGAATCTCAGAGGCATTCTTATCATTTGGTAGATCCAAGTCCATGGCCTATTTCG
GGTTCACTCGGAGCTTTGGCAACCACTGTAGGAGGTGTGATGTATTTATTCTCTACTTTTAATTCAGTTGTTAATTAGTAATTAGTAAGACAATTGTTAT
TTTTTCCTTTTGATTTTTCTTCTCTACTAATTTTATGTTATGAGTTTAATTATAAAATATTTATTTTAACTTTTGAATTATTTTTCTCTAATTTATTATT
GATTTTTTTTAGGTTAATTCCTAACGAAGCTATCATGAGGATAAAAACAAATATAAGTGCATAAAAAAAAATCTATTTTTATACTATATTCTTTAGTGCA
TGTTATATTATATTTTTTCAAAGC