Detailed information on CNT30227343


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670935Ananas comosusSetaria viridis24.2439.7884.68111forward
CNT30525152Ananas comosusPhaseolus vulgaris27.9513.9785.16128forward
CNT30710616Ananas comosusGlycine max25.338.6683.62116forward
CNT30395045Ananas comosusTriticum turgidum40.619.8286.56186forward
CNT30152086Ananas comosusPrunus persica26.6417.4583.61122forward
CNT3039995Ananas comosusMarchantia polymorpha45.8524.5380210forward

Expression of CNT30227343

Peptides detected in this lncRNA

>peptide 1 (72 aa)
VAQVVDPVLRLPALPPRAAPRARPRGVERGDAAAHDVVDVGEVAREVDAVAAAVDGDGLALQDGAREGEVGR*

>peptide 2 (41 aa)
CCPGCRSGTAPPRASAPRGPPCSAARCRARRRSRARRRRCR*

Sequence

>CNT30227343
TGTTGCCCAGGTTGTAGATCCGGTACTGCGCCTCCCCGCGCTTCCGCCCCGCGCGGCCCCCCGTGCTCGGCCGCGCGGTGTCGAGCGAGGCGACGCAGCC
GCGCACGACGTCGTCGATGTAGGTGAAGTCGCGCGCGAGGTCGACGCCGTCGCGGCCGCGGTAGACGGTGATGGGCTTGCCCTGCAGGATGGCGCGCGCG
AAGGCGAAGTAGGCCGGTGACGGAGAGGCCGTAGATGTGGTTGTAGGCGTGGGTGATCTCCTCGCCGGCCTTCTTGGTGGCGGCGTAGAGCGAGGCGGGG
CGGTCGGTGGGGTCGGACTCGGAGAAGGGGACCTTGTCGTTGAGGCCGTAGACGGAGGACGACGAGGCCCAGACGACGGCGGGCTGGGGGTCGGCGGCGC
GGCAGGCCTCGAGGAGCGCGACGAGGCCGGCGACGTTGGAGCGGACGTAGGAGGCCGG