Detailed information on CNT30227197


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677148Hordeum vulgareSetaria viridis17.7438.588.3177forward
CNT30524614Hordeum vulgareSetaria italica25.3523.9785.45110forward
CNT30244472Hordeum vulgareAvena sativa50.2329.982.11218reverse complement

Expression of CNT30227197

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MQHMHVNGIHTSSSARISFYSSPSIATLAPISSILAT

Sequence

>CNT30227197
CAAAACTCTTTCGAGAAAATTAAAATATTGAGCATGCATAGACTGACAACAGTAATCAATGTCCAATAAAATTGGCAAGGGCGCAGACAATATGTAAATG
TATTATAACATACGTGCACGCTACATATCATTGTGGACACTCTCTATGGCCTTATTACAAGCAGCAAGAGCAACTAAATAGGCTTATGAGCTGACACACA
TGCACAAATGCATGACATATATGTAATTCAGACAAACACATGGTTCAACCAGAGTTGTCCCCAAACATTCAACAACTTATTGTAGGTAAACATTAACATA
ACTTGACCATAGCTTGAAGCAATGCAACATATGCATGTGAATGGCATCCATACTAGTAGCAGTGCACGCATATCATTTTATTCTTCTCCTTCCATCGCGA
CATTGGCTCCCATTTCTTCCATCTTAGCAACAAC