Detailed information on CNT30226851


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 8e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695212Hordeum vulgareOryza sativa24.8523.8691.02167forward
CNT30596773Hordeum vulgareOryza meridionalis24.8525.3491.62167forward
CNT30370840Hordeum vulgareOryza glumipatula24.8523.1991.02167forward
CNT30102906Hordeum vulgareOryza rufipogon24.8521.4985.03167forward
CNT30117414Hordeum vulgareOryza nivara24.8519.7291.02167forward
CNT30551485Hordeum vulgareOryza brachyantha20.3917.6194.89137forward

Expression of CNT30226851

Peptides detected in this lncRNA

>peptide 1 (48 aa)
TRNRVQMHTFIYTGIHSPYQRTHTLFYEYFSHTELTYHLVIYKVAVGK*

>peptide 2 (35 aa)
KHGTEYRCTRSYTQGYTHLINVHTPYFMSTSHTLS*

Sequence

>CNT30226851
AAACACGGAACAGAGTACAGATGCACACGTTCATATACACAGGGATACACTCACCTTATCAACGTACACACACCCTATTTTATGAGTACTTCTCACACAC
TGAGCTGACATATCATCTTGTGATTTACAAAGTCGCCGTAGGCAAATAAATGGAAGAGACTTGAACTGTGATGTGATGGACTGAAGATACCACAATCCCT
CCTACCATCCAACAATCACACTCTTTTGGTTCGACTTGAGAAAATTAACACAGGCATTAATAAGCAATCAAATTCCGACCACAGCAGCAAGTACTAATTA
CTCTGTAACTCCTCAATATCCTGATACAGTTCATGCATCGTGCATATACACGCGCACGCCGGAAACGGATGGAAATACACAAAATCAGTGAATTCAAGCG
GTGAGCTCCTCCTCCTTGTGTGTCTCGATGACGAGGAAGCTCTGGTCGGACTGCTCGATCTTGTTGCAAAGAGAGGCAGGGTAAGCAGCTTATGCGGTGA
GCTCCTCCTCCTTGTGGGTCTCGATGACGATGTCGGACTTGGGGTAGGCGTGGCAGGAGTAGGGCAGGTCGATGCCCTCCTCCTCGGCCTGGTCCAGGAT
GTAGACGTCGTCGGGGACCTCCAGCTCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTG