Detailed information on CNT30226496


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678101Hordeum vulgareSetaria viridis5032.9593.1116forward
CNT30201082Hordeum vulgarePisum sativum95.2637.4682.81221forward
CNT30172901Hordeum vulgareTrifolium pratense42.2410.8684.6998reverse complement
CNT30258536Hordeum vulgareAvena sativa98.2834.2392.11228forward
CNT30627897Hordeum vulgareDaucus carota98.7115.2282.53229forward
CNT30477847Hordeum vulgareArabidopsis halleri61.2164.5583.8142forward
CNT30622174Hordeum vulgareCajanus cajan98.7131.4684.28229forward
CNT30596588Hordeum vulgareOryza meridionalis90.0990.0989209forward

Expression of CNT30226496

Peptides detected in this lncRNA

>peptide 1 (76 aa)
NLIAFQTSQAAARSGIYLQAARIISLPSQARSHPSLRVCTQASKATRLVAASDAFPQGFPKVPPPNCNTESSPKISG

Sequence

>CNT30226496
GAATTTGATCGCCTTCCAAACTTCACAAGCTGCGGCTAGGTCAGGAATCTATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCAAGCAAGATCACAC
CCTTCGTTACGAGTTTGTACACAGGCTTCTAAAGCCACTCGGTTAGTTGCTGCATCAGATGCATTTCCCCAAGGATTTCCTAAAGTTCCTCCACCAAATT
GTAATACAGAATCTTCCCCAAAGATTTCGGGT