Detailed information on CNT30226471


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305412Hordeum vulgareTriticum aestivum42.7157.2486.47170forward

Expression of CNT30226471

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MKDEHHGQAFIRGGWHEPASSTAQDLTNVPRHQIAHPTTDRPNGNYGRQIIAQPTLHPPAR*

>peptide 2 (48 aa)
MNTTGRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMETTVDKS*

>peptide 3 (30 aa)
MNAPSSCPESALVAAALAVAHVLPEPIHTGQ

Sequence

>CNT30226471
TTCTGTTAATCATCAGTTTCATTCACACCAAAAGGAAGGAGTGAACTGCCAACTTCAAAGGCACACAGGGGAGTGAGTTGAGACTTGAGACAGACAACGA
AACATTGCATTGAACTCTCTGATGAAAGATGAACACCACGGGCAGGCGTTTATTCGAGGCGGCTGGCATGAACCAGCAAGCAGCACTGCCCAAGACCTCA
CGAATGTGCCGAGACATCAAATCGCACACCCCACGACAGACAGACCAAATGGAAACTACGGTAGACAAATCATAGCGCAGCCGACACTTCACCCTCCTGC
TCGATGAATGCGCCCTCTTCATGCCCCGAATCCGCGCTAGTTGCCGCTGCTCTCGCCGTTGCTCACGTACTTCCAGAACCCATACACACCGGTCAGGG