Detailed information on CNT30226235


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 2e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675565Hordeum vulgareSetaria viridis50.4534.8894.69113forward
CNT30568151Hordeum vulgareActinidia chinensis42.4114.2983.1695forward
CNT30596694Hordeum vulgareOryza meridionalis36.169.6392.5981forward

Expression of CNT30226235

Peptides detected in this lncRNA

>peptide 1 (73 aa)
QLAGDHLPGAGGAGAGAAGVGQVDPFLLGVVEDVDVVGDLEDVDVVGDLQLHLALGRHQLHLVRRLRAEPGSPH

>peptide 2 (73 aa)
PAGRRPPSRRRRSRSRRGRSRAGRSLPPRRGRGCRRRRGPRGCRRRRGPPAPPRPRASPASPCTSPARGAWLPA

Sequence

>CNT30226235
TCCAGCTGGCCGGAGACCACCTTCCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCTTCCTCCTCGGCGTGGTCGAGGA
TGTAGACGTCGTCGGGGACCTCGAGGATGTAGACGTCGTCGGGGACCTCCAGCTCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTG
CGCGCGGAGCCTGGCTCCCCGCAC