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Detailed information on CNT30225946


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 5e-126

BLAST vs NONCODE:
NONSTUT001352, E-value = 5e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441267Hordeum vulgareAegilops tauschii100.4110092.75731forward
CNT30666302Hordeum vulgareTriticum dicoccoides71.8410094.07523forward

Expression of CNT30225946

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MVTRASPKRAKDGTFLTALPAKVEEERDMVAAAIGKLRKVSAVWVLKEMSECGDDLREEGGGDYLRQQEVS*

>peptide 2 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 3 (36 aa)
EAATWVEWVDDLTEWAACNAVPLDGAHEHDLTCPNS*

Sequence

>CNT30225946
TCGAAGCTGCCACCTGGGTAGAGTGGGTCGATGATCTCACCGAGTGGGCCGCCTGCAATGCGGTACCCCTCGACGGCGCCCATGAGCACGACCTGACATG
CCCAAATAGCTAGGATGCTTTGGGCGTGGACAAGGCTTGGGTTGCCAAGGTAGTCGAGACCACCCTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAAC
AGCCTCACCGAACTTGACGCCGTTGCGGGCGAGCAACTCAGGAAAGACACAACCAAGTGCCCCGAGCATGGCCCATCGGCAATGGATCACCTCCAGCTCC
CGGTTCTTGGCAAAGGTCTCAGGGTCAGCTGAAAGTCCGGCAGTGTCCCATCCATAGTCGCCAGGGAACTCACCAGTGAGGTAGCTCGGGGGCTCACCGG
AGAGTGGGCCGAGGTAGAGCACACGGTCAGCACCGTACCATGGGCTGCCGGAGGAAACCTGCTTCGCCTTTGCTGCGGTCTTGCGCATGGTGACTCGGGC
CTCCCCAAAGAGAGCCAAAGATGGTACGTTCTTGACCGCCTTGCCGGCAAAGGTCGAGGAGGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGA
AAAGTGTCCGCTGTATGGGTTCTCAAGGAGATGAGTGAGTGTGGAGATGATTTGAGAGAAGAGGGGGGAGGTGACTACTTAAGGCAGCAGGAGGTGTCAT
AGGGAATCCATTTGGTGTGTAATCTGAC