Detailed information on CNT30225874


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30286278Hordeum vulgareTriticum aestivum2.7636.9996.3108reverse complement
CNT30655558Hordeum vulgareTriticum dicoccoides2.424.7497.8794reverse complement
CNT30679209Hordeum vulgareTriticum urartu2.422.2797.8794reverse complement
CNT30719808Hordeum vulgareTriticum spelta2.422.0797.8794reverse complement

Expression of CNT30225874

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MEPAVRMQLAGLGEDNRQEGLCRRPSPHPLRPLLEAQFERATWRSQIRGGSGSPTSFPV*

>peptide 2 (69 aa)
MQVRYRVRLLLLQLQLSRRPGGRPAEASTRMRGGQATNQASTITSSPPNQSQFHCPQSHVLYAATLRRC*

>peptide 3 (69 aa)
MQQHYAGAEGEHQDLLRGERWHHQPRGCATGVVSCDDGRVHQRSSQGWSGCKQDHCCGRNIHIWFAGQF*

>peptide 4 (30 aa)
MACNHNKTRHLPCIYIFLSSSNNLTMLSMT*

>peptide 5 (41 aa)
MPNIMTWMCYIYIMGYGLCYMMYECAMDYVICCMYVLWWVLY

>peptide 6 (33 aa)
MWASTDLDSSSRNSLHLGVPCAAPPPLVAAALG*

>peptide 7 (53 aa)
MCGFLLYVHPRLVVGMKNKIYMVCMEARLIIQILQPLNQFTSSYMQIFYHPIV*

>peptide 8 (42 aa)
MEVFYYLYSLTGILGENNSSKLSVPLSCKCGTACGCSCCSCN*

>peptide 9 (54 aa)
MEEYIREAPRAGQVANKTIVVAGTSISGLLANFKFLFMRRGAEPAASVLCCWQL*

>peptide 10 (69 aa)
MVALWNERSRVNGRNICFLILYFISFSQILLQNSFWFGAFSLVLSKFHSSLHCLSVLYQNIILSILLVS*

>peptide 11 (31 aa)
MIVYKLEFQTTFIWLCIIKYKSKFKHTIYNT*

>peptide 12 (30 aa)
MCHILCSNAKYYDMDVLYIYNGIWIMLYDV*

Sequence

>CNT30225874
ACTGGATAAAAAAACACCACAGCTAGCGCGCACCAGCGCCCCTCCCTCTCGCGACTGAAAATAGCTAGGGTTCCACCGCGAGTCTCCTAGCCGCCGTCGT
GAGCCTCCCAGCCGCTGTCGCGAGCCTCTCCGCCGCCGCTGTCGCGAGCCTCTCCGCCGCCGCCGGTGCCCTCCATCGTCGCGAGCCGTTGCCAGTGCCC
TCCCCGGCTGCCGCCACTGGTGCTCTCCCAGCCACTGTCGTCCGTCTGCAGACGCCATGGAGCCGGCGGTGCGCATGCAGCTGGCAGGGCTCGGTGAGGA
CAACCGCCAGGAGGGGCTGTGCAGGCGGCCGTCGCCCCATCCGCTCCGTCCTCTCCTCGAGGCCCAGTTCGAGCGGGCAACATGGCGGTCCCAGATTCGC
GGCGGATCTGGCTCGCCCACCTCTTTCCCAGTCTGAGATACTGAAGGTCTACCTCGGCAACGCCCCAGCCGGAACAGTCATGACCACGTACATATTGGGG
ACAAGCTCTTGACGACTCCACCGTTTGATGATGATCTAGCTATTGGGCGTTCAGGACCTGAGTGTACTGCAGGAAAAGACCATGGAGATGGACAAGGAAA
AGATGTATCATACAGTTTATCAAGGAAGGTCTAGGAACATGCTGTGAGTTGAGATCAGCATGGCCTGCAACCACAACAAGACAAGACACCTACCATGCAT
ATATATTTTCCTTTCAAGTAGCAACAACTTGACTATGTTGTCTATGACATAACAAGGACGAGATATGACAACCTTTTGCATGTGTCAACAGTAAGCTCTC
TTATGTTTTGTTGTAAAAAATAGTTAACCTCCAGAATTATTATGTTTTATTTATTTTCTCACATCAAGTGTGCTTGAGTGAAATCAGATGGTGGCTCTTT
GGAACGAACGGTCAAGAGTAAACGGAAGAAACATCTGTTTTCTCATACTTTATTTCATTTCTTTTTCTCAGATTCTACTCCAAAATAGTTTTTGGTTTGG
AGCATTTTCACTGGTTCTTTCCAAGTTTCATTCTTCTCTTCATTGTCTATCGGTTCTCTATCAGAATATTATACTTAGTATACTCTTGGTTTCCTAAGTT
ATATGATTTATTTGTTGCTAGGATTATTCTGACATGTGTAAGCCTTGATTTTGATGAACAAGAGCCTGTTTTTTGGCACGACTCCCAGCTGCAGGTACCT
ATTTTTGAATAAAGGAGATCTCCCAGTTTAGTTGTAAGATCTTTATGAGTTTCTATTCGCCTTCTATAATCTGCACGTATTATGTGTAATTGCACAATGG
TATTTTGTGGTATAGACAGTCTAACCTTTCTGAGTATGGTGGCCAATTAATGCGCCCTAGCCATTTTCTTGCATATCTATGCTGAAATTCCGAGACATCT
TTAGAATTATTTATTTCGAATAAACTGAATCAATCATTCATAAAAGAAGGAGCAAACATAGGTATAATTTATCAAGAACATAAGCTTTAATTACCCGGGC
CAAATGCACTATGTGTTAGTCTGATCACTTATGGTATGTTAACTGTATATTCTCAAGTACAGTGTTATGGTTAATTAATTTTTGTTTCATATTATTGGCT
AACTCCCCTAATCTGATTTGCTGCAATGTCTTCTGCCTCATTTTTTCTTTATTTTGTGCAAATTCTAGCAGCATTTTATTTTTGGGTTATGTACTGAGTA
TATGTCCACAACCTATGCGGTTCAACTGAATGATTAACTTAAAGCAGAAATAAATGGTTTCATCGCAATATCATTCTCTTCATTTCAATTTTGTGGGAGA
TATTTATGGACTTCCACATTAAGAGCATTATACTATCAATTCTGTATTGACAGTGCAACAACAATCTGTTCTCATTATGTCATATATATTAGAAGTACAA
CGTGGTACATGCATTTAGCATGACACAGTTAGTAGAGTGTAGAAATGGAAATGGAAGAACAGAAAGATGCCTTCATTGACAATAAGTTTATGATGTGTTC
GTTGGTTTGCCCCCTTAAATAATATAACATTCAAGCATATTATTTCAGTGAATGTCGGATGAATTCTATTATACTTAATGAAATTGCTAAAATAAATAAT
ATATAGATGTGTGGTTTTCTTTTGTATGTTCATCCCAGATTGGTTGTAGGCATGAAGAACAAAATTTATATGGTGTGCATGGAAGCACGCCTTATAATTC
AAATTCTCCAGCCCTTAAATCAGTTTACCTCTTCATACATGCAAATTTTCTATCATCCAATTGTATGATGGTCTTATTCATAACATAACTGATAATTGAT
ACTCTATTTTGCCCGACCTTCTTTAGATAAGCCAACCCATTTGTGGTACGTATATGGCTATTTCTGTTGTTCTCTGGCCGTAATTGAAAATCCACCCTAA
AATATAATCTTATTCAGATGGTGAAGAATTATTTTGTTCTCTTTGTCAATGAGCATATGAAGTAGAAGACCTTTTGGAGTTACAAAATTGGGCGAATAAC
CTTTTCTTACTGCTCATTTTTTCCAATGATAGTGTACAAGTTAGAATTTCAAACTACTTTTATTTGGTTGTGTATAATTAAATATAAAAGTAAGTTTAAG
CATACTATATATAATACATAAAAATGCTAATGAAATAAAGTCAAATATGTTTGGATTTTGACTTTCCATATGCTACTAGCCCGTGCAACTTCACGGGTCA
GCGACTAGTTTATTTATAGTTATTGGGATCGTGAATAAGATGATGTGTCACCCAAATCTCCTCGTGCCAATTAGTTCACTATAACTTACTCCCTCCGTCA
AAACGTTTTTATATTATGGAAGTTTTTTATTACTTGTATAGCCTAACTGGGATCCTCGGAGAGAACAACAGCTCCAAATTGTCAGTACCACTCTCATGCA
AGTGCGGTACCGCGTGCGGCTGCTCCTGCTGCAGCTGCAACTGAGCCGGCGGCCAGGAGGCCGGCCGGCAGAGGCGAGCACGAGGATGAGAGGAGGACAA
GCAACCAACCAAGCAAGCACCATCACCAGTTCGCCACCAAACCAATCTCAATTTCACTGCCCCCAGTCGCACGTTCTGTATGCAGCAACACTACGCAGGT
GCTGAAGGAGAGCATCAAGATCTACTGCGCGGTGAACGATGGCATCATCAACCTCGTGGATGTGCCACCGGCGTCGTTTCTTGTGACGATGGAAGAGTAC
ATCAGAGAAGCTCCCAGGGCTGGTCAGGTTGCAAACAAGACCATTGTTGTGGCAGGAACATCCATATCTGGTTTGCTGGCCAATTTTAAATTCTTGTTTA
TGCGGAGAGGCGCCGAGCCAGCTGCTAGTGTCCTCTGCTGTTGGCAGTTGTGAGCACCTTCTGCTCCATATTTGTGTTTGTTCAGAATTGTTGGCTAGAA
ACACCCGAACATTCATTTTGGAGTACTCCAATAGCAGTAGTTGATGAGATGAATGTGGGCATCAACCGACCTCGACAGCAGCTCCAGGAATAGCCTTCAC
CTGGGTGTGCCGTGTGCAGCACCACCACCACTAGTAGCAGCAGCTCTAGGATAAGGCCTAGAGGTGGAGTGGAGGAGTGCCGTGTGTAGCAGCAGCACCA
CCAGTAGTAGCAGGAGCTCGGGAGAGGAGGATCGCCTGGGCCTAGAAGTGGAGGCGCTTGGACCTGGGTGCAGTCTTGGAGGTGGAGGCGCCAGGATCTG
GGTGGAGGTGGATGTGGAGGTTGAGGACAGGGCCGGAGGTGGAGGTCGGGGCGAGGCCGGATGTGCCATATATTATGTAGTAATGCCAAATATTATGACA
TGGATGTGCTATATATATATAATGGGATATGGATTATGTTATATGATGTATGAATGTGCTATGGATTATGTTATATGTTGTATGTATGTGTTATGGTGGG
TGCTATATGC