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Detailed information on CNT30225690


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-92

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-72

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180697Hordeum vulgareSecale cereale65.1824.9394.29438forward
CNT30387004Hordeum vulgareTriticum turgidum65.1860.1693.84438forward

Expression of CNT30225690

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSDDSTSRVIVLPVRVFTKICMPPLRRRTRWRVDSFWML*

>peptide 2 (58 aa)
MSNARAITDHHGGGAPGEGWTPSECCSPRGCGHPPAACRRRSGAAGPGGCPPCPGSWP*

>peptide 3 (29 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSR

>peptide 4 (32 aa)
AQVRKSTVNECMQIYRMFAYSLLNNTAIPATV*

Sequence

>CNT30225690
GCGCAAGTTAGAAAATCAACAGTAAATGAGTGCATGCAAATTTACCGGATGTTCGCTTATTCATTACTAAATAATACTGCTATACCAGCAACTGTTTAAA
CCAACACATGACTCGATAGTTCATCAAACAAACACAATAGGACTGACACGAACGAGATAACAGTTCAATGATCCGCCGGACGAACGACCACCAGGATGTC
CAACGCCAGGGCAATTACTGACCACCACCAGGATGTCCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTC
TGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCT
TGGCCTTGACATTGTCAATGGTGTCTGACGACTCCACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCACCCCTAAGACG
GAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAGATGAGGCGCTGCTGGTCC
GGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGG