Detailed information on CNT30225280


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39129|STR16_ARATH, E-value = 2e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185762Hordeum vulgareSecale cereale59.812.9598.36122forward
CNT30303937Hordeum vulgareTriticum aestivum62.7531.1488.28128forward
CNT30397702Hordeum vulgareTriticum turgidum58.3331.0789.08119forward

Expression of CNT30225280

Peptides detected in this lncRNA

>peptide 1 (34 aa)
TGPQSGSQQGTGPPWSGAPQPDRRSPGCAPCHGA*

>peptide 2 (66 aa)
PDPRAAANKEPVLLGVERRNLIDEVRVALLAMGRDGEVVGHVALLAVGVDGEVVRHVARSGDMAAVE

Sequence

>CNT30225280
ACCGGACCCCAGAGCGGCAGCCAACAAGGAACCGGTCCTCCTTGGAGTGGAGCGCCGCAACCTGATCGACGAAGTCCGGGTTGCGCTCCTTGCCATGGGG
CGTGACGGAGAGGTAGTAGGGCACGTTGCGCTCCTTGCCGTGGGGGTTGACGGAGAGGTAGTAAGGCACGTTGCGCGCTCCGGCGACATGGCCGCGGTCG
AAGT