Detailed information on CNT30225274


BLAST search results

BLAST vs Swiss-Prot:
sp|P14717|PAL1_ORYSJ, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369501Hordeum vulgareOryza glumipatula29.4414.4895.8973forward
CNT30100429Hordeum vulgareOryza rufipogon47.588.792.37118forward
CNT3040161Hordeum vulgareMarchantia polymorpha43.957.5786.24109forward

Expression of CNT30225274

Peptides detected in this lncRNA

>peptide 1 (81 aa)
HQWVVGAACVVGVAEHGLAVDGGDEALLAEARAGEVAGRVHGQPVVVELVDELRELREHELANVGDGETGVVHGHTDGCALE

Sequence

>CNT30225274
CATCAGTGGGTAGTTGGCGCTGCATGCGTCGTCGGCGTAGCTGAACACGGCCTCGCGGTCGATGGCGGTGATGAGGCTCTTCTCGCTGAAGCGCGCGCTG
GAGAGGTCGCCGGTAGGGTTCATGGTCAGCCCGTTGTTGTAGAACTCGTTGACGAGCTCCGAGAACTGCGCGAACATGAGCTTGCCAATGTTGGCGATGG
CGAGACGGGTGTTGTCCATGGACACACCGATGGGTGTGCCCTGGAAGT