Detailed information on CNT30225179


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 6e-174

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30345522Hordeum vulgareEragrostis tef55.1354.0887.15537forward
CNT30575045Hordeum vulgareOryza barthii60.7862.7185.81592forward

Expression of CNT30225179

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRYPSTAPMSTTWHAQIARILCAWTRLGLPR*

>peptide 2 (32 aa)
MARRPFLISFTLSSANASGSSARPRGSKLPPG*

>peptide 3 (29 aa)
MAHRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 4 (32 aa)
MEVDKSNHYFAQNSRNLHHGSTTQTTRKHASW*

>peptide 5 (38 aa)
MPQGLQPGQEGRSCHLGRVGRRSHRVGRLQCGTPRRHP*

>peptide 6 (87 aa)
MVRRMQGATWKWTNQTIILHKTLVIYIMVVQLRPQENTPHGEHSPKTPYLPGTKLVAKAHALLLTGSAMWSARLSSGPFPVTIAWTK*

Sequence

>CNT30225179
TGTGTCTTCCACCAATATGGTAATACTTAAATAAGGGCACACAGAAGTATTTATCTGTTCTCGTGAACCATGCTCACAATAAAATGGTCAGACGGATGCA
AGGCGCGACATGGAAGTGGACAAATCAAACCATTATTTTGCACAAAACTCTCGTAATTTACATCATGGTAGTACAACTCAGACCACAAGAAAACACGCCT
CATGGTGAGCACAGTCCCAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCGAAGGCCCATGCATTGTTGTTGACGGGGTCGGCGATGTGGTCAGCGA
GGTTGTCGAGTGGGCCCTTTCCAGTGACGATAGCTTGGACAAAGTAGCCAAACATTGAGAACATGGCGAGGCGACCATTCTTGATCTCCTTCACCTTGAG
CTCGGCGAATGCCTCAGGGTCTTCAGCCAGGCCAAGAGGGTCGAAGCTGCCACCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCTGCAATG
CGGTACCCCTCGACGGCACCCATGAGCACCACCTGGCATGCCCAAATAGCTAGGATACTTTGTGCGTGGACGAGGCTTGGGTTGCCAAGGTAGTCGAGAC
CACCTTCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACAGCCTCACCGAACTTGACGCCGTTGCGGGCGAGCAACTCAGGGAAGACACAACCAAGTGC
CCCGAGCATGGCCCATCGGCAATGGATCACCTCCAGCTCCCGGTTCTTGGCGAAAGTCTCAGGGTCAGCTGAAAGTCCGGCAGTGTCCCACCCATAGTCG
CCAGGGAACTCACCGGTGAGGTAGCTCGGGGGCTCACCAGAGAGTGGGCCGAGGTAGAGCACACGGTCGGCACCGTACCATGGGCTGCCAGAGGAAACCT
GTTTCGCCTTTGCTGCAGTCTTGCGCATGGTGACACGGGCCTCACCGAAGAGAGCCGATGACGGTATGTTCTCC