Detailed information on CNT30225171


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB23|METK2_HORVU, E-value = 3e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3025499Hordeum vulgarePopulus trichocarpa29.039.8988.8972forward
CNT3036529Hordeum vulgareCucumis melo36.2920.9884.4490forward

Expression of CNT30225171

Peptides detected in this lncRNA

>peptide 1 (31 aa)
KSRLMLIIPGLKSKFSFTSLRISLSGILPVP*

>peptide 2 (75 aa)
VQVNADHPGPEVKVLLHELEDLPVGDLAGAVGVDEHRQRLSQAQVPFLRTSVRRAPSLVASMWVRGISSGVSSVA*

Sequence

>CNT30225171
AAGTCCAGGTTAATGCTGATCATCCCGGGCCTGAAGTCAAAGTTCTCCTTCACGAGCTTGAGGATCTCCCTGTCGGGGATCTTGCCGGTGCCGTAGGAGT
CGACGAACACAGACAAAGGCTCAGCCAGGCACAGGTGCCATTCTTGCGGACCTCGGTGAGGCGAGCTCCGAGCTTGGTGGCAAGCATGTGGGTGAGGGGC
ATCAGCTCAGGGGTCTCATCCGTGGCATAGCCAAACATGATGCCCTGG