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Detailed information on CNT30225149


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-77

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575387Hordeum vulgareOryza barthii61.9958.7493.75336forward

Expression of CNT30225149

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MFTDHHGGGAPGGGWTPSGCCSQPGCGHPPAACQQRSGAAGPGGCPPCPGSWP*

>peptide 2 (53 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPRRRSTRWRVDSFWML*

Sequence

>CNT30225149
CAAGCAAAAGCAAATTTACCCGAAGTTCACTTATTCATTACTCAATAATACTGCTGTACCAGCAACTGTTTAAAACCCATAGGTGACTCGATAGTTCATC
AAACAAACACGATAGGACTGACGCGAACAAGATAACAGTTCAAATTATCGAAACAGGGCACCACCCGCAGGACGAACCAGGATGTTTACTGACCACCACG
GAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGC
TGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGG
TCTTCACGAAGATCTGCATACCACCACGCAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAG
CTGTTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGAT