Detailed information on CNT30224838


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 2e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499073Hordeum vulgareDigitaria exilis80.3723.0988.95172forward

Expression of CNT30224838

Peptides detected in this lncRNA

>peptide 1 (70 aa)
SGDDGLHEEAEHGEHGEAAVLELLDLELGGCVGVVGEAKISGNTHPRAPSIAHREWITSSSLFLAKVSGSA

>peptide 2 (69 aa)
PVTMACTKKPNMENMARRPFLSSLTLSSAAVSGSSARPRSRGTRTRGLRASPTASGSPPAPCSWRRSLGQ

Sequence

>CNT30224838
TTCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTGACCTTGAGCTCGGCGGCTGTGTCGGG
GTCGTCGGCGAGGCCAAGATCTCGGGGAACACGCACCCGAGGGCTCCGAGCATCGCCCACCGCGAGTGGATCACCTCCAGCTCCCTGTTCTTGGCGAAGG
TCTCTGGGTCAGCC