Detailed information on CNT30224837


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549614Hordeum vulgareIpomoea triloba91.5838.8993.59359forward
CNT30205015Hordeum vulgareHelianthus annuus32.9131.4695.35129forward
CNT30724803Hordeum vulgareLupinus angustifolius39.0326.5694.12153forward

Expression of CNT30224837

Peptides detected in this lncRNA

>peptide 1 (40 aa)
VTGTDHKKSGNLCIVIPGPRMLKIVVIKLIEPKIDEIPDR*

>peptide 2 (31 aa)
MIYYLIVEMPCQVHLSELEQTNYQIHLSSPA*

>peptide 3 (30 aa)
MSGAPIRIRTNQLPNPPIIAGITIKKIIKKA

Sequence

>CNT30224837
CTGTCACTGGAACGGACCACAAAAAAAGTGGTAATCTATGCATAGTCATTCCAGGTCCACGCATGTTGAAGATAGTTGTTATAAAATTGATAGAACCTAA
AATTGATGAAATACCTGATAGATGAAGACTAAAAATTGCTAAATCAACTGCTCCTTCAGAATGGCTAGTAATACCACTTAAGGGTGGATAGACTGTCCAC
CCAGTGCCGCTGCCCACTTCTACTAAGGCTGAGCTTAATAGGAGCAAGAGACTTGGTGGCAACAACCAGAATGATATATTATTTAATCGTGGAAATGCCA
TGTCAGGTGCACCTATCAGAATTAGAACAAACCAATTACCAAATCCACCTATCATCGCCGGCATAACCATAAAAAAGATCATTAAAAAAGCG