Detailed information on CNT30224696


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30505424Hordeum vulgareNicotiana attenuata90.9142.9297200forward
CNT30508435Hordeum vulgareSolanum lycopersicum55.916.484.55123reverse complement
CNT30203049Hordeum vulgareHelianthus annuus90.9175.7697.5200forward
CNT30574572Hordeum vulgareVitis vinifera90.912.9797.5200forward
CNT30335929Hordeum vulgareCynara cardunculus45.9127.3798.02101forward
CNT30725732Hordeum vulgareLupinus angustifolius90.9144.3595.5200forward

Expression of CNT30224696

Peptides detected in this lncRNA

>peptide 1 (45 aa)
TVEGRFQRRKAMGRYESVIHGSPIGKPYPSSVASLRSLDFSNLAN*

Sequence

>CNT30224696
GACAGTGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATATGAATCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCGTGGCT
AGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCAACCGAGACCCCGTTAGTAGCGGCGAGCGAG
AGCGGAACAAGGGTTTTCGT