Detailed information on CNT30224633


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3058969Hordeum vulgareAmborella trichopoda23.119.5989.4185forward

Expression of CNT30224633

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MQSVSALDYSIPGRRIMAPRKHSIQQQHLLQPRDDKTDVSYIRAFTAQRRSRTLPMIINPNERSTK*

>peptide 2 (38 aa)
IIPLELVQYHQYSKCISAHLPGAFISRLACKRSAIGGN*

Sequence

>CNT30224633
ATTATTCCCCTAGAGCTTGTCCAGTACCACCAGTACTCAAAATGCATCTCCGCGCATCTACCTGGCGCTTTTATTAGCCGCCTTGCATGCAAGCGAAGCG
CTATTGGCGGCAATTAATAGCTCACTGAGCGATGATTGATGCAGTCAGTCAGTGCCCTCGATTATTCTATTCCTGGTAGAAGGATCATGGCACCCCGGAA
GCATTCCATCCAGCAGCAACATCTCCTTCAACCACGCGACGACAAAACTGATGTTAGCTACATTCGAGCGTTCACCGCACAGAGGCGATCTCGAACACTA
CCTATGATAATAAATCCAAACGAAAGGTCGACAAAATGATTCAATCTGACTTTATCGGTATTCTGGGT