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Detailed information on CNT30224243


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT002216, E-value = 3e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30394768Hordeum vulgareTriticum turgidum91.3280.2289.13957forward

Expression of CNT30224243

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MACTKKPNMENMARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 2 (38 aa)
MPRGRRQDQAGRSCRLGRAGQQSHQVVLRQCGNPRRRP*

>peptide 3 (37 aa)
MVTRASPKRDDDGKFFTALPAKAGEESDMVVAAILIN*

Sequence

>CNT30224243
CAAAATCCTTGTAATTTACAATATGATAGTACAAATTAGACTGCACGACGGCACACTTCACCGCGAGCATAGTCTCTAGGACAGCTTATTTCCCAGGAAC
AAAGTTGGTGGCGAATGCCCAAGCATTGTTGTTGACAGGGTCGGAGAGGTGGTCGGCGAGGTTCTCAAGTGGACCCTTGCCAGTGACAATGGCTTGCACA
AAGAAACCAAACATGGAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTAACCTTGAGCTCAGCAAATGCCTCGGGGTCGTCGGCAAGACCAAGCGGGT
CGAAGCTGCCGCCTGGGTAGAGCGGGTCAACAATCTCACCAAGTGGTCCTCCGGCAATGCGGTAACCCTCGACGGCGCCCATGAGCACGACCTGACACGC
CCAGATGGCAAGGATGCTTTGCGCGTGCACGAGGCTTGGGTTGCCAAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCAAACA
GCCTCACCAAACTTAACACCGTTGCGGGCAAGCAGCTCGGGGAAGACACAACCGAGTGCGCCAAGCATAGCCCACCGACAATGAATCACCTCCAGCTCAC
GGTTCTTGGCGAAGGTCTCAGGGTCAGCTGATAACCCGGCAGTGTCCCAGCCGTAGTCACCAGGGAACTCCCCGGTGAGGTAGCTCGGGGGCTCGCCAGA
AAGCGGACCGAGGTAGAGCACACGGTCAGAGCCGTACCATGGGCTGTCGGAGGCAACCTGCTTGGCCTTTGCCGCCGTCTTGCGCATGGTGACACGTGCC
TCGCCAAAAAGAGACGATGATGGCAAGTTCTTCACTGCCTTGCCAGCAAAGGCTGGGGAAGAGAGTGACATGGTCGTTGCGGCCATTCTGATCAATTGAG
GTTCTGTGTGTTCAAGAGTGAGGAATGTGTGTGGAGATGGCTTGAGAAGATTGGAGCAAGAGCCTTCTTAAGGAAGTGGACGCAGAGAGGGAATCGACCG
CTGTAGGCTGAGAGGAGAGAGGTGTATAGCCAGAAATCTATATCTTGG