Detailed information on CNT30224139


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 9e-60

BLAST vs NONCODE:
NONSLYT002586, E-value = 1e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640134Hordeum vulgareNymphaea colorata63.8228.284.54194forward
CNT3071371Hordeum vulgareQuercus suber45.0747.7486.86137forward
CNT30263812Hordeum vulgareBrassica rapa84.5437.7987.55257forward
CNT301916Hordeum vulgareZea mays44.0832.9289.55134forward

Expression of CNT30224139

Peptides detected in this lncRNA

>peptide 1 (99 aa)
ESLSHQVLLIILHGHTKLLQHRPQLILLIIHAGGYDLLDWLVAELNESSLAGSCPSVLGGPFLCGWVKEVLTPQPLHHLCLINSKLGGIHLSKVCKGESP

Sequence

>CNT30224139
ATGAGAGCCTTTCCCATCAAGTCCTTCTCATCATTCTTCATGGTCACACCAAGCTTCTTCAACATAGGCCACAACTTATCCTTCTGATCATTCATGCAGG
TGGCTATGATTTGCTTGATTGGCTCGTAGCAGAACTGAACGAATCCTCTCTTGCAGGTAGCTGTCCCAGTGTTCTTGGAGGTCCATTTCTTTGTGGCTGG
GTCAAAGAAGTTCTCACCCCACAGCCTCTCCATCATCTTTGCCTCATCAACTCCAAACTTGGAGGCATACATCTTAGCAAAGTTTGTAAGGGTGAAAGCC
CACC