Detailed information on CNT30223811


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43206|CATA1_WHEAT, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640148Hordeum vulgareNymphaea colorata67.296.5288.19144forward
CNT30243876Hordeum vulgareAvena sativa78.0422.1884.43167forward
CNT30663894Hordeum vulgareTriticum dicoccoides88.798.0896.84190forward
CNT30263082Hordeum vulgareBrassica rapa72.4346.2779.35155forward
CNT302263Hordeum vulgareZea mays85.9816.4795.11184forward
CNT30347744Hordeum vulgareEragrostis tef66.829.1389.51143forward
CNT30116279Hordeum vulgareOryza nivara55.615.9994.96119forward

Expression of CNT30223811

Peptides detected in this lncRNA

>peptide 1 (70 aa)
GGVEPGGEVVDLLVAVHEVHESVVVVVVVGALGRVGRQQQVVWPEAVALRVGVGEDPGLQQLVASCSFSAK

Sequence

>CNT30223811
GGCGGGGTCGAACCTGGAGGGGAAGTAGTCGACCTCCTCGTCGCGGTGCATGAAGTTCATGAGTCCGTCGTAGTGGTTGTTGTGGTGGGAGCACTTGGGC
GCGTTGGCCGGCAGCAGCAGGTAGTTTGGCCCGAGGCGGTGGCGCTGCGTGTCGGAGTAGGAGAAGATCCTGGTCTGCAGCAGCTTGTCGCCAGCTGCTC
GTTCTCGGCGAAGA