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Detailed information on CNT30223808

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30344884	Hordeum vulgare	Eragrostis tef	9.68	21.3	89.8	49	forward
CNT30117908	Hordeum vulgare	Oryza nivara	9.49	22.02	89.58	48	forward

Expression of CNT30223808

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MVCRVNGVRPMTYSPGTSPLSSSSMPALEVATGAGFGFGAGFLLKRSKRETIFCAPAVGAAV

>peptide 2 (51 aa)
MQITAVLTWRSPLASCPDQKDRSRSCKSKGKASNWFRCISLMFTYMSISAM*

Sequence

>CNT30223808
GCAGGATTGCTTAGTCGAGAGAATATGTTCTGAAATTCGATAGAATACTTCACAGATTAGTCCACACTTGCAAAATGCAGATTACTGCTGTACTTACTTG
GCGAAGTCCTCTGGCTTCTTGCCCAGACCAAAAGGATCGTAGCCGTAGCTGCAAGTCCAAAGGGAAAGCAAGCAATTGGTTCAGATGCATATCACTTATG
TTTACTTACATGAGCATTTCAGCCATGTGAGAGCTTGTGGAGTACTATGCTGCTAAAGGAAACAGTCTTGTGCTATGAAGATTGCTCTCGCAGAGCTGTG
GCAAAGCATGACTAATGTATGGTGTGTAGAGTAAATGGAGTGAGGCCTATGACTTACTCTCCGGGAACCTCGCCGTTGAGTTCGTCGTCGATGCCGGCGC
TCGAGGTGGCCACGGGCGCGGGCTTCGGCTTCGGGGCAGGCTTCTTGTTGAAGCGGTCGAAGAGGGAGACGATCTTCTGCGCGCCGGCAGTCGGCGCCGC
TGTGGC