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Detailed information on CNT30223773


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592619Hordeum vulgareMusa acuminata26.496.5583.44151forward
CNT30354619Hordeum vulgareLactuca sativa25.448.785.52145forward

Expression of CNT30223773

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MQCKQGSLLTLHLACVGGKEGGIGKTRPYTLISTRKRHSGSD*

>peptide 2 (32 aa)
MNSVIDQTSTKEQENVCALARDEREIRCLFFR*

Sequence

>CNT30223773
TATCTAATCAGACTGAAATTGATGTCGAAGACACGATCATTCACATCAATTGAAGCAGGCAGGAAGGGCGCGGAAGCTACCGTTTAACGAATGCAATGCA
AGCAAGGTAGCTTGCTTACTCTCCATCTAGCGTGCGTTGGCGGCAAGGAAGGAGGCATTGGAAAGACTAGACCATACACATTAATTAGTACAAGAAAGAG
GCATTCGGGAAGCGACTAGTCGCTTCTGGCGAAGCTTAACAAAGGCCGACTACTACATAGAGACAACTACTACCAGTCATGAGCGATAGTGAAGCCGTCA
GAGGCAGAAGCTGTCGCTTGACGGACGAAGCCGAGCCGATACGATAGGCGGGCGAAGTGAGCGAGACCAAGACGGGCTAGACGTGGAGTGGCGAAGGGGG
CCTACTATACGTATACGTGATTAGTAAGCGGTTCAAGACATCGAACGAAAAATCAAGTGAACTAATGAACAGTGTGATTGATCAGACAAGTACCAAGGAG
CAAGAAAACGTATGCGCTTTAGCAAGGGATGAGCGCGAAATCCGTTGCTTGTTCTTTCGGTAGCCTTCTT