Detailed information on CNT30223767


BLAST search results

BLAST vs Swiss-Prot:
sp|P58311|PSAA_WHEAT, E-value = 3e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30382315Hordeum vulgareManihot esculenta55.329.8687.02208forward
CNT30689225Hordeum vulgareTriticum urartu89.128.4495.22335forward
CNT30369168Hordeum vulgareOryza glumipatula58.246096.8219forward
CNT30149145Hordeum vulgareBrachypodium distachyon93.3519.5497.72351forward

Expression of CNT30223767

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MKVHATQPKKDNGKLPEMSTKDFSRNLLQITSMTIEIVSIGM*

>peptide 2 (31 aa)
MAGSGPFLKRCFYRIPIHNNFYFWFRRTNNH*

Sequence

>CNT30223767
NCTTGCCCTACTATAGGCCAAACTACCTGAGCACTGGGTCCAATGTGAGTAGGATCACTTAGCCATGCTTCATAATTGGAAAAACGGGCACCATGAAAGT
ACATGCCACTCAACCAAAGAAAGATAATGGAAAGTTGCCCGAAATGAGCACTAAAGACTTTTCTAGAAATCTCCTCCAAATCACCAGTATGACTATCGAA
ATCGTGAGCATCGGCATGTAGGTTCCAGATCCAAGTGGTAGTATCAGGGCCCTTAGCTAGTGTTCTTGAGAAATGGCCGGGTCTGGCCCATTCCTCAAAA
GATGTTTTTACAGGATCCCTATCCACAACAATTTTTACTTCTGGTTCCGGCGAACGAATAATCATTAAGTCCTCCA