Detailed information on CNT30223753


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185816Hordeum vulgareSecale cereale83.3357.1194.67225forward
CNT30296517Hordeum vulgareTriticum aestivum100.3796.4491.14271forward
CNT30143197Hordeum vulgareLolium perenne32.5916.788.6488forward
CNT30683620Hordeum vulgareTriticum urartu61.853390.42167forward
CNT30100642Hordeum vulgareOryza rufipogon47.0420.8588.98127forward
CNT30575864Hordeum vulgareOryza barthii47.0418.9688.98127forward

Expression of CNT30223753

Peptides detected in this lncRNA

>peptide 1 (33 aa)
CLISQNYMINIIVLNYVNDNKSLSSYKRTTSIT*

Sequence

>CNT30223753
TGCTTGATTTCTCAAAATTACATGATAAATATTATTGTCTTGAATTATGTAAATGATAACAAATCCTTATCCAGCTACAAAAGAACCACCAGCATAACAT
GAAAGAATTATAAAAGCTGCTTCAGTAATCTCTTCCTCGAAAAGAGCTATATCCAGGCCGTAACCATACACTCTTGACTTCCCAAGCTAGCTACTTGGCT
GCTGCCTTGCCGTTCCCAGCAGCAGCAACGGCATCAGGAGTAGCAGATGGGTTCATGCCACACATGGGGA