Detailed information on CNT30223402


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555782Hordeum vulgareOryza glaberrima23.9126.1384.62104forward
CNT30243612Hordeum vulgareAvena sativa29.896.7886.92130reverse complement
CNT30578589Hordeum vulgareOryza barthii25.5212.3185.59111forward

Expression of CNT30223402

Peptides detected in this lncRNA

>peptide 1 (60 aa)
VVVGRTGRMLSRSERRENDFSTPFAALESSKYETGPTSTGTVSTPSCMEEHVSRHHFPFS*

Sequence

>CNT30223402
GTTGTTGTCGGAAGGACAGGAAGAATGCTATCAAGAAGTGAAAGAAGAGAGAATGATTTCTCCACACCCTTCGCCGCCTTAGAGAGCAGCAAGTATGAGA
CTGGTCCAACAAGCACTGGAACCGTGTCAACACCAAGCTGCATGGAAGAACATGTAAGCAGGCATCATTTTCCATTCAGTTAAGAACTTAACAGTATTGT
TGCAAAAGGTGCTTTAGAAACACATGGAGACAAAATCTGAAGATCCTTAAAATGAATTTCTATATTCAATTAGGTATGCAAATGCCAAATGGTAATGCAT
TATTGTCTGCACGATAGAAAAACATATGTGTTCCAGGACTATAAATTTCAACTTCAGGTATAGGACAAAATTAACTGGTCAGTGTTTTTCCGTATAGGAT
TGTTAAGATGTGGGGTCTGCTCGTCCAGATGTGGC