Detailed information on CNT30223236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677182Hordeum vulgareSetaria viridis11.4622.8796.0851forward
CNT30555402Hordeum vulgareOryza glaberrima25.1713.9391.07112forward

Expression of CNT30223236

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFLLPLIIYTYGTFVLSYFSPVKFTQHIMLHRTHACS*

>peptide 2 (63 aa)
MQLSINSRRRRTGNQRPAHRLGTLSAAPEMTVSSAAWSGSVARPSGSNGPPGWSLSSNSCRRS*

Sequence

>CNT30223236
AACGATGATGAAAACATTTGAGAAATTACTCAAGTAGCAGTGGTCCGAAACTCCCATCAGAAATCAGAACGATGATGAAAACATTTGAGAAATTACTCAA
GTAGCAGTGGTCCGAAACTCCCATCAGAAATCAGAACGGTCATGTTTCTTCTGCCCTTGATAATTTACACGTACGGCACATTCGTACTCTCATACTTTTC
CCCGGTAAAATTCACACAGCACATCATGCTGCATCGCACGCACGCATGCAGCTGAGCATCAACAGCCGACGGCGGCGGACGGGCAATCAACGGCCAGCTC
ACAGGCTGGGCACCCTCTCGGCGGCGCCGGAGATGACGGTGAGCAGCGCCGCCTGGTCGGGGTCGGTGGCGAGGCCGAGCGGGTCGAACGGGCCGCCTGG
GTGGAGCTTGTCATCGAATTCCTGCCGGAGAAGTTGACGAAACCG