CANTATAdb - search

Detailed information on CNT30223174

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30484247	Hordeum vulgare	Chara braunii	24.95	9.41	89.31	131	reverse complement

Expression of CNT30223174

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQD*

Sequence

>CNT30223174
TTTGTTGTGGATTGGATGATGGAAAAACCAGCAAGCAGCAAGCGTAGTTAGAAAAGTTGCCGTAGAGCGCCCTACGGAGTTGTACAAAGTCAGCAACCAT
TTTGGGGCGCAAGCATAGGCAACACAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATTCGGCCAAAGAAGGTGA
TAGCCCTGTTCATTCGTTCCCATGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTAC
CGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAGGACTAGTACGAGAGGACTGGGTTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGC
CGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGCTTTTTGAATAGAACTTCGATAGGCGAG
AGGTGTAAGCACCGCAAGGTGTGAA