Detailed information on CNT30223144


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43206|CATA1_WHEAT, E-value = 4e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616919Hordeum vulgareSesamum indicum49.0632.282.69104forward
CNT30295853Hordeum vulgareTriticum aestivum47.1714.88100100forward
CNT30592095Hordeum vulgareMusa acuminata26.4218.9889.2956forward
CNT30552704Hordeum vulgareOryza glaberrima46.734.1486.8799forward
CNT30663726Hordeum vulgareTriticum dicoccoides10025.6398.58212forward
CNT30715065Hordeum vulgareMalus domestica golden28.774.2986.8961forward

Expression of CNT30223144

Peptides detected in this lncRNA

>peptide 1 (69 aa)
VEAVLVVRVDGLDVEGPLRVVSGGDGVGEVLGGVAVVGVDAGAVHVAVVGGHADVVEEEGEHVERLRVVG

Sequence

>CNT30223144
AGTCGAAGCGGTCCTCGTGGTCCGGGTCGATGGTCTGGATGTAGAAGGTCCACTCCGGGTAGTTTCCGGCGGCGATGGAGTCGGTGAGGTCCTTGGTGGC
GTGGCTGTGGTTGGTGTTGACGCCGGAGCCGTCCATGTGGCGGTAGTCGGCGGGCACGCCGATGTCGTCGAAGAGGAAGGTGAACATGTGGAGCGACTCC
GGGTGGTGGGAG