Detailed information on CNT30223142


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30683126Hordeum vulgareTriticum urartu94.9921.8298.241648reverse complement

Expression of CNT30223142

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MGPWPLSLDSLVRDMNAGFGFQLICIHRDLPLLDFLHFSSCCGKNVEQMSLRGGFLFTLNQPTSSLFQNLTIISV*

>peptide 2 (34 aa)
MLLWLAFGSFFYWLVSGMIVSISFGKQVRLSHKC*

>peptide 3 (34 aa)
MDKRVWLHRVRKKTWWYQHCVSLTMLYVIWLKQW*

>peptide 4 (40 aa)
MTNLVRWLFSTTRFTTFYFFLCIKFPLIYNFILLSICIFLF

>peptide 5 (54 aa)
MVIEITFTGTILCKLGEGNQSSHQEVPETWFSIKVLLFQRLLFKFFSSSPLAPL*

>peptide 6 (29 aa)
MACFWLFLLLASLRHDSFNFFWKASAAQS*

>peptide 7 (29 aa)
MMNIGFTFYCLREEISIWNSNLYLSYDEE*

>peptide 8 (29 aa)
TADTDRLDPERDFSQSLPIAGLVVLSWSD*

>peptide 9 (32 aa)
QQIRIDWIQKGISASPCLLLGWLFCHGPISRR*

Sequence

>CNT30223142
GACAGCAGATACGGATAGACTGGATCCAGAAAGGGATTTCAGCCAGTCCTTGCCTATTGCTGGGCTGGTTGTTTTGTCATGGTCCGATTAGTAGAAGGTG
AGTGAGTAAGACGAGGCCCCCGAAGCGTAATGTAGAGCTATACTGCTCTTGTTTTTCCTTCCGCCCTACTTAGGAGAACTTTGTCTAGAACCCACTTTAG
CTAGCTTTCGAGGATACCATTACAGATGAGTGAAGCGAGTATACCGTTTCCGGAGCTCCCGAGGTAGCGCGGTAGCGGAAGCCCTTTCTAGTTCAAGCAG
TTCCAATTCCTATTCTGCTTCACCGCTTACACCACACTCTATTGGTTCGCCTTGTGGTGCCTTTCGATCAAGGTCTACTTTGGTTGATCCACTTTCTTCT
ACAGCGCGTTATCCGCATCGAAGTTAGCCAGGTTCCTACCGCTTCTTGATATTATGGATTTTGCAATCCCTGAACGCCAGTGCTTCTACAACCAACGGAT
ACTGTTTAACAGAAATAATAAGTAGAAATGGACAAACGAGTGTGGCTACACAGAGTGAGGAAAAAAACATGGTGGTACCAGCATTGCGTATCACTCACTA
TGCTTTATGTAATATGGCTTAAGCAATGGTAAAATGGGAGTCCTGAGCAAAGCACATCTGATCGATATGAATGAAAGATACATCCGTCTTTTCTTCTCCT
TCGAAGGTTAGGTATCCGCTCGTTAGTTCAGCGCCGCATAAATACTGACTTTAAAAGGGGCGACTCCCGCCTGTGCTTAAGTTGTTTCAAGCTTGTAAAG
ACTCGCGATCGGAAGATTGACCTGGTTTTCTTTCAGCTGAAACTCTACCTAATGGTTCAGATTCCCCGGGTCCATGGGTCCATGGCCGCTTAGCTTAGAC
AGCCTTGTTAGAGACATGAATGCGGGGTTCGGTTTCCAATTGATTTGTATTCACCGGGACCTCCCCTTATTGGATTTTCTCCACTTTTCTAGTTGCTGTG
GAAAGAATGTTGAGCAAATGAGTTTAAGGGGTGGTTTTCTGTTTACTTTGAATCAGCCTACGTCGTCTCTCTTCCAGAACCTCACAATCATCAGTGTCTG
AAGTTTCATGATGAATATTGGTTTCACATTTTATTGCTTACGTGAGGAAATATCAATTTGGAACTCGAATTTGTATTTGAGTTATGATGAGGAGTGAGGT
AGATTCGCATTGTTGAAGAAAGCGAAGAAAAAGGATGCTGCTATGGCTTGCTTTTGGCTCTTTCTTCTATTGGCTAGTCTCAGGCATGATAGTTTCAATT
TCTTTTGGAAAGCAAGTGCGGCTCAGTCATAAGTGTTAGTAATAGCATGAAGTAAGTTGTCGGTAGCCGGCATTAGGTAAAAGGAAAAGCTTCTCAAAAG
CATCCTGAAATATCATAGAATGGTGATCGAGATCACCTTCACGGGAACCATCCTTTGCAAATTGGGGGAAGGGAACCAATCAAGTCACCAAGAAGTTCCC
GAAACTTGGTTTAGTATTAAGGTTCTTCTCTTCCAGCGTTTACTATTCAAGTTCTTCTCTTCCAGCCCCCTGGCCCCTCTCTGATAAGGAAAGTTTTCAA
AACGAAAAGAAAATGACAAATCTGGTTCGATGGCTCTTCTCCACTACTCGCTTTACTACTTTCTATTTTTTCTTATGTATTAAGTTTCCCTTAATATATA
ATTTTATATTACTTTCGATTTGTATATTTTTATTC