Detailed information on CNT30223060


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30296689Hordeum vulgareTriticum aestivum67.3444.5982.98235forward
CNT30392802Hordeum vulgareTriticum turgidum67.3432.2882.98235forward

Expression of CNT30223060

Peptides detected in this lncRNA

>peptide 1 (36 aa)
DGTDRITTGSMIPFYQNAETTLFSEYTEDSSYPEEQ*

>peptide 2 (44 aa)
METGNVLQKSITTLDRESRDESLPKVSSGGGVGIAGRVLRGEAC*

>peptide 3 (98 aa)
MRKQHYFQSTLKTLLILKSSRRTTMKDTKGTPQKQTRPCNCKRNGNGKRFAEINHHPRSRESRREPAQSVIWRWSRHCRPCAQRRSVLMSAVSWWPVRR

Sequence

>CNT30223060
GTGATGGAACAGACAGAATCACAACCGGTTCCATGATTCCATTTTATCAGAATGCGGAAACAACATTATTTTCAGAGTACACTGAAGACTCTTCTTATCC
TGAAGAGCAGTAGACGTACTACTATGAAAGATACCAAAGGCACGCCCCAAAAACAGACTAGACCTTGCAATTGCAAAAGAAATGGAAACGGGAAACGTTT
TGCAGAAATCAATCACCACCCTCGATCGAGAGAGTCGAGACGAGAGCCTGCCCAAAGTGTCATCTGGCGGTGGAGTAGGCATTGCCGGCCGTGTGCTCAG
AGGAGAAGCGTGTTGATGTCGGCGGTCTCGTGGTGGCCGGTGAGGCGGC