CANTATAdb - search

Detailed information on CNT30222956

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30659176	Hordeum vulgare	Triticum dicoccoides	12.97	30.7	99.01	101	reverse complement

Expression of CNT30222956

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVNKAMGFPSLAHLGVSYRNSIHIGSIFYTTLQ*

Sequence

>CNT30222956
ATTTCCTCTTTCGGTAGCTGACACCGAGATGGGCTAGGCTAGGAAACCTTATTCGAGACGATAGGGATGGTAAACAAAGCGATGGGGTTTCCTAGCCTAG
CCCATCTCGGTGTCAGCTACCGAAATTCCATCCATATTGGATCAATTTTCTATACCACTTTGCAATGAAAAGAGGAATGTTTGTTATGGTAAAACTTCGT
TTAAAACGATGTGGTAGAAAGCAACGTGCGACTTGAAGGACATGATCGAATATCATTAGATTAGTGAATTCCCACGCGCCAAACAGGCGTCACCACACTG
CCTCCCAAAGGCTTCTTTTAGGCTTCCCCGCCACATCACACGCTTGCTTGCTTTTGCTAATCCGATCCAGAAAAAACGAACATTCTCCCACGTGCTTCGG
GCCTTGCAATAGCAGTAGATGCTACAGACGTGGTGTCATTATCAGTGATTCCTCAATCGATCAGAAGAAAGGGAATATAACCTGCCCCTCATTGTCCAGG
TTTTCTTTGAACAACATCGGCCGGACGAGAACAAAGGTTTTCACCTGCTTCGTCCTGGGAATTGTTCGAGCTACATTCCGTTCAGACTAGATATCCGGAA
TCTAGTCCTCTCTGTCCTAGCTTAACAACCGTTTTTTTTGTCTTAAGACAATAAACCACTTCGTTTAGCCTGCCAAGAGTCGCATTCCTAACAACAGGAA
CATCTGAGTTTATCTCACTATTTGCATTCTTAGGTCCGGACAAGAACAAGAGGTTTTCACCATCGTCTTTGCGCTTTTT