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Detailed information on CNT30222882


BLAST search results

BLAST vs Swiss-Prot:
sp|P68538|MI25_WHEAT, E-value = 8e-129

BLAST vs NONCODE:
NONMTRT001482, E-value = 6e-140

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535768Hordeum vulgareEucalyptus grandis39.4556.893.09376forward
CNT30592658Hordeum vulgareMusa acuminata49.4221.5289.81471forward
CNT30555485Hordeum vulgareOryza glaberrima27.8121.2298.87265forward
CNT30435041Hordeum vulgareAegilops tauschii31.0610098.65296forward
CNT30688229Hordeum vulgareTriticum urartu62.6419.8699.33597forward

Expression of CNT30222882

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MRREEVAFRSVADFTFRFRHNKACTVFSHLGAQRAVGNDSTTVLQIRKLILSNRCSSLDSSGITSLGLKNCCNSS*

>peptide 2 (33 aa)
MSGHPHNRDLKKKYHTIVVFRAKKNGSSLSIDN*

Sequence

>CNT30222882
CGACGCATGAATGAGATTCTTCTTATTCTTCCTAAATAGAACCCCCCACCCTCACCTTTCTTAGGACTATCAAGCCTTCTCGAATTAGGTCTATGGTAGA
AGCTTTGAACGTAGACCCGGATACAAATCTTTCACTCACTGAAAAGTGAAAACCTGTGACTATATCGTCCTGAAGACGGATGCGGCGGGAAGAAGTGGCA
TTTAGAAGTGTTGCTGACTTTACATTTAGGTTTCGGCATAACAAAGCTTGCACTGTCTTTTCGCACTTAGGCGCACAGCGTGCCGTTGGTAATGATTCTA
CTACGGTGCTGCAAATTCGCAAGCTGATCCTAAGTAATCGTTGTTCTTCATTGGATTCCTCCGGAATTACTTCGTTAGGATTGAAGAATTGCTGCAATTC
TTCCTGAATAGACTCGATTCTCCCGTCGAGAGTTTCTTTGAAAGTCTTACCTAAACTCTTCCGACTGAATATGAGAAAGCCTATAAAACAACGAGCTACT
ATCATTTCTTCATTATAGATTGAGATCTTCTTCGGACTTGATGCACAAATAGATGGAATAGCAGCAAATAGCATATTTCTATCCTTCATATCCGTAGAAA
TCAATCTCATCTCCAGGTAACTCCATCTTTTTCAGCTCTGCTCCCGAAAAGAGAAAGGAGACTGAGATAGGGGTTGTCCTTGGTTTTTCCAAGGAAAGCC
TGATTTAGCATGTAACGTGAACATGAGCGGACACCCACACAATCGAGATTTGAAGAAAAAGTACCATACCATTGTTGTTTTTAGGGCGAAAAAGAATGGG
TCATCTTTGTCAATTGATAACTGAGTGAGAGAAGACAATCACGTTCTTAAAGCGGTCGGTTCGCCGGATTCACAACCTTCCCCTATTGGCCGGCTGCCCG
TGAAACACATAGGCTCCTATCGCATTTATCGATCGAGAATAGTCTCATCTCAC