Detailed information on CNT30222864


BLAST search results

BLAST vs Swiss-Prot:
sp|P17784|ALFC1_ORYSJ, E-value = 6e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3074945Hordeum vulgareBrassica juncea21.758.388.3177forward

Expression of CNT30222864

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MPGRTLPSLRMSTNGLPPLVLWYRVSSKRITPLRYWRAPGVQKRSSRRARRLSSTFSTLMLAKRLPMV

Sequence

>CNT30222864
GCCAGACCCTGAGCATTCTGGTTGATAGAAAGCTGTGATGGCTCGGTTGGGCCAATCTTGAGAACGGCACGCCACTTGGCAAAGCGGGCACCAGCCTCGT
AGTACTTGGCGCAGCGCTTGCCAAGCTCGACGGTACCCTTGTCCACCTTGATGCCTGGGAGGACATTGCCCTCCTTGAGGATGTCAACGAACGGCTTGCC
ACCCTTGGTGCTCTGGTACAGGGTCTCCTCAAAGAGGATCACACCGCTGAGGTACTGGAGGGCACCAGGGGTGCAGAAGAGGAGCTCACGGAGGGCACGG
CGGTTGTCCTCGACGTTCTCAACATTGATGCTGGCGAAGCGCTTGCCGATGGTG