Detailed information on CNT30221864


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 4e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619448Hordeum vulgareSesamum indicum28.1350.1890.89571forward
CNT30197509Hordeum vulgarePisum sativum33.2529.6694.22675forward
CNT30633270Hordeum vulgareCapsicum annuum16.3539.990.36332reverse complement
CNT30147395Hordeum vulgareMedicago truncatula33.2515.8994.22675forward
CNT30439823Hordeum vulgareAegilops tauschii13.9463.3198.94283reverse complement
CNT30468144Hordeum vulgareSaccharum spontaneum80.8958.3598.781642forward
CNT30627916Hordeum vulgareDaucus carota33.2518.7194.96675forward
CNT30574574Hordeum vulgareVitis vinifera33.2520.0594.81675forward
CNT30104639Hordeum vulgareOryza rufipogon29.1153.8399.32591forward
CNT30577102Hordeum vulgareOryza barthii9.9588.9997.52202forward

Expression of CNT30221864

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MCAAMCSDYAILLVAFGLDSPLPRRDQLLRLGKRLKKSVSVYMCLRLCYPFPGKEIICLVKKRE*

>peptide 2 (57 aa)
MKSFLSIDVSGLRRYSTLREECNGMDGRGLPAPKSDDSLVPLSIGTLWHTTATTPAL*

>peptide 3 (32 aa)
MKDDLESTQEDRESHIREKVTNGVEPSNIAKA*

>peptide 4 (36 aa)
MLPLPRKGDYMFSKKTRIKNQKERRERTGSWRLHNR*

>peptide 5 (39 aa)
MGIKKNRKMQIFYEILSFHRCIWSETVQYSTRGMQWDGW*

>peptide 6 (44 aa)
MELNQVTLQRHNDSRVGISPPSEPDVRVSPHPALRRGISTHCFP*

>peptide 7 (45 aa)
MGVYRRSQRLARKGCYTKHYYLTTKKEKTIVVTRLTIVVRPAALA*

>peptide 8 (52 aa)
MGLDSFTCIPASTTKSSGLNAPTEAVQPFLGFVESGFPFTHNGGAAPTNQSR*

>peptide 9 (56 aa)
MVGAANSDSARISFFGSTKGELAQKLDRGKDAAGCRRLIQVPPEPREMVAYYTAHKL

Sequence

>CNT30221864
AGGTATGATTCCGATCTTTGAATCGAATTGGATTTTTTGTCTTAAAGTGAGGGCGATGAGTGGGGAAGGAAGCTGACGATTTTATTAGTGTGTAAGGTGG
CCCCGAGAGGTGAACCAAAGCCAACCGTTTCGAGACCAGGGAGCTTTAACAGTTTCTACTTAAACTATGTGTGCAGCTATGTGTTCAGATTATGCTATTT
TATTAGTAGCTTTCGGTCTCGATTCGCCCTTACCTCGGAGGGATCAACTACTTCGCTTAGGCAAAAGATTGAAAAAGTCTGTATCTGTCTACATGTGCCT
CCGTCTATGTTACCCCTTCCCCGGAAAGGAGATTATATGTTTAGTAAAAAAACGAGAATAAAAAATCAAAAAGAAAGAAGAGAAAGAACTGGGAGTTGGC
GCCTACATAACAGGTAGCTTGCTTACCAAGCCATCTTGGCAAGCTCCTACAATTCTCTTATTACTCTTGACTTGACTTATTAATAAGAAAACTACTCACT
AACAAAATGAAAGACGATCTAGAATCTACCCAAGAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATGGAGTTGAACCAAGTAACATTGCAAAGG
CATAATGATAGTAGGGTCGGGATATCCCCGCCCTCCGAACCGGACGTGAGGGTCTCCCCTCATCCGGCTCTCCGCAGGGGAATCTCCACTCACTGCTTCC
CCTAATATCCTCCCTTTACCACATCATGGGGGTTTACAGGAGATCCCAGAGACTCGCTCGGAAAGGCTGCTATACCAAACATTATTACTTAACTACAAAG
AAAGAAAAGACTATAGTAGTCACTAGACTGACTATAGTAGTCCGTCCGGCTGCTCTTGCTTAAATCATTACTCTTCATTCTCCCGTGCTCTAGCAATTGC
GCTCCCTAGACCACTACCATTTAGTTAGGTAGGGACAATCAATCCATAGTTACGGGAATAACGGAATACATGGGGATAAAAAAAAATAGAAAAATGCAGA
TTTTCTATGAAATCCTTTCTTTCCATAGATGTATCTGGTCTGAGACGGTACAGTACTCTACGAGAGGAATGCAATGGGATGGATGGTAGAGGGCTGCCTG
CGCCCAAAAGCGATGATTCACTTGTCCCCTTGTCTATAGGGACCTTGTGGCATACAACCGCCACGACTCCTGCGTTATAGCCGCCCCTTTCTCTCTTTCT
TTTGACTGCCTCGTGGACGGACGAAAGAAGGGAAGTTACAGAAGGGGGCAGTGAAGGCTCGCCAAGTAGACAGCAAGCCCCCACCCCGTCAGTCCTGTGT
TGCCGTAGCGTGCCCTACTTCAATAAGGTATTACCTCGCCGATTTTAAAGGGGATGGGATTGGATTCATTCACTTGCATTCCTGCTAGCACTACAAAAAG
CTCCGGTCTTAACGCCCCTACGGAAGCTGTGCAGCCTTTCCTCGGGTTCGTAGAGTCGGGTTTCCCGTTTACCCACAACGGAGGAGCCGCCCCCACCAAC
CAAAGCAGGTAGGCGGCCACGGTTCATAACGCACTCTTCGCACAACAGATCCACTTTGAAGTTGACTTATTCGCTCGGCCAATCGTCGGAATGTGTATGA
GATACCATAAGGGCCCAATATCTCAATAGCACCCTTGTCTAAAGCTTCGAATGAGACTGAATATCCGAAACGCAGGAACGATCTGACTAGAAAGTCATTC
AAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCTATAGAGTCGATTACAAAAAGTACTAGTTTGAAAGGCTCGTTGGAATTGATCCGCTACGAGAT
TTACATTATACGCTAGAGAAGCACCTGAAGTACTAAACAGAATAGGTATTAGTTTTGTAATGGTTGGGGCAGCAAACTCGGATTCGGCAAGAATCTCATT
TTTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTAAAGACGCAGCCGGGTGCCGGCGGCTTATTCAAGTGCCCCCCGAACCGCGCGAA
ATGGTCGCCTATTACACGGCTCACAAACTC