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Detailed information on CNT30221828


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632746Hordeum vulgareCapsicum annuum17.921.7292.36157reverse complement
CNT30383861Hordeum vulgareTriticum turgidum20.329.5298.31178reverse complement
CNT30511784Hordeum vulgareSolanum lycopersicum35.4647.3490.35311forward
CNT30656195Hordeum vulgareTriticum dicoccoides12.3142.02100108reverse complement
CNT30689226Hordeum vulgareTriticum urartu41.7319.7493.17366forward

Expression of CNT30221828

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVGSRPFLKRCFYRIPIHNNFYFWFRRTNNH*

Sequence

>CNT30221828
CCGGAGTCTTTTTTTTTCTTGATTATTTGAAATCCAAATCGAAATGCCTCAACTTGATAAATTGACTTATTTCTAACAATTCTTTTGGTTATGTCTTCTC
CTATTTACTTTTTATATTCTCTTATTTAATAATAAAACTCCAATCCAGGATCCCTCGAAAAGTGAAGTGAACTAGCCAGGTAGAACAGTCAGGTTAGGAA
AAGAGTCTTTCATGTCAAGGTGATACCACTCTGGAAGAGCTCAGATTCTAACCTTGTGTCAGACCCACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTC
TATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGACATTGGTCCTCGAGTGCAAAGGCAGAAGGGAGCTTGT
CCAAGAATTCACTATATATTCTTAATCAACGGTTTTCTTGCTGGGGCGGACACAGATTTCTCTCTAAAGGTGAAGAAAAATAAGTGGGCGAACACTCGGC
CCAGCGGGCGAACATGCCACTCAACCAAAGAAAGATAATGGAAAGTTGCCCGAAATGAGCACTAAAAACTTTTCTAGAAATCTCCTCCAAATCACCAGTA
TGACTATCGAAATCATGAGCATCAGCATGTAGGTTCCAGATCCAAGTGGTAGTATCAGGGCCCTTAGCTAGTGTTCTTGAGAAATGGTCGGGTCTCGCCC
ATTCCTCAAAAGATGTTTTTACAGGATCCCTATCCACAACAATTTTTACTTCTGGTTCCGGCGAACGAATAATCATTAACTCCTCCTCTTTCCGGACAAG
ACATACAAAGAGACCCGCCAACTGTCTTTTTTTTAGTGAATCTTTGAAAGATAGATTTTGAAAGATATATTTTGGAG