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Detailed information on CNT30221823


BLAST search results

BLAST vs Swiss-Prot:
sp|P26667|RBS2_WHEAT, E-value = 3e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30351770Hordeum vulgareEragrostis tef43.0834.4381.85336forward

Expression of CNT30221823

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MLVHTQIIKKKVMLWSESRVVDKSEIHKRPSYDIGHCFTS*

>peptide 2 (31 aa)
MHICSTTYARTYTDHKEESYALVGKQSRGQK*

Sequence

>CNT30221823
CCACCCACTAGTTGTGAGACATCCATTGCAGTGCTAAATAAAATAAACTTTTCCGATAATTAACAGCAAGACAATGGTCCGCTTGTTGTATATTATAAAT
ATGACACAGGTGTTGGATATGTGTAGGGGGTGCTAGAATTTACATATGCATATATGCTCCACAACCTATGCTCGTACATACACAGATCATAAAGAAGAAA
GTTATGCTCTGGTCGGAAAGCAGAGTCGTGGACAAAAGTGAAATTCACAAAAGACCTTCATACGACATAGGCCATTGTTTCACCTCGTAGTTTATGCCTT
GCCGGACTCCTCGCAACCCGGTGGCCTGAAGGCGATGAAGCTGACGCACTGCACCTGCCGCAGGTTGTCAAAGCCGATGATACGGACGTAAGCGTCAGGG
TATTCCTTCTTGACCTCCTCCACCTCGTTAAGCACCTGTGTAGCGTCGGTGCACCCAAACATAGGCAGCTTCCACATTGTCCAGTATCGGCCGTCGTAGT
ACCCGGGGGAGCTGTTGTGCTCACGGAAGACGAAGCCAACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAGCGGATCAGGTAGTCAACCTGCTTCAG
GAGGGCCTCCGTGGTGAGGGGTGGCAAGTAAGACAGGGTCTCGAACTTCTTGATACCCTCAATCGGCCACACCTGAATGATTGGAAATTATGGAACGCTT
AACACTTAGTGCTAGTAACTGCTAAGTGCAGTAATTGTAATGTGGAAGAAACTCATATCAGTTTTGTGCCCCGACATACC