Detailed information on CNT30221809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30444207Hordeum vulgareAegilops tauschii91.4363.0698.031067forward
CNT30665732Hordeum vulgareTriticum dicoccoides85.6961.297.21000forward

Expression of CNT30221809

Peptides detected in this lncRNA

>peptide 1 (49 aa)
SPRNPKTLISHKVSAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD*

>peptide 2 (75 aa)
MLMYPERWLALSTLISSNNDAENTTRPIKARSAMPAEGSSRSNYELFNCNNFNIRYWSWNYRGCWHQTCPPIDPC*

>peptide 3 (32 aa)
MKYECPRLSLLIITPILKANTIGPESYDVIPC*

>peptide 4 (41 aa)
MRPVLLFIVTTSPCQDWVICALAAFLGCGSRFSGSISGIEP*

>peptide 5 (30 aa)
MMRRRHKGHAIRRVIMNHRISEQSPRQPFI*

>peptide 6 (31 aa)
MTTGRINQVSHFATFFIDARAEISVAESRVD*

>peptide 7 (98 aa)
MPKTRPGQLRLGARCRPKGRVGPTMSFLTATTLIYAIGAGITVAAGTRLALQLILVKGFRLYSFQLPDTNAPGIVIYCHYLPVSGLGNLRACCLPWMW*

Sequence

>CNT30221809
TCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGTCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGAC
TAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTAGTTCGTCTTTCATAAATC
CAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCTGAAGGCCAACACAATAGGACCGGAATCCTA
TGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAATAACGATGCCGAAAACACGACCCGGCCAATTAAGG
CTAGGAGCGCGATGCCGGCCGAAGGGTCGAGTAGGTCCAACTATGAGCTTTTTAACTGCAACAACTTTAATATACGCTATTGGAGCTGGAATTACCGTGG
CTGCTGGCACCAGACTTGCCCTCCAATTGATCCTTGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTA
TTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCTTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCATCTCCGGAATCGAACC
CTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACAAAGGCC
ATGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCACGTCAGCCTTTTATCTAATAAATACGCCCCTCCCCAAAGTCGGGGTTTGT
TGCACGTATTAGCTCTAGAATTACTACGGTTATTCGAGTAGCACGTACCATCAAACAAACTATAACTAATTTAATGAGCCATTCGCAGTTTCACAGTTCA
AATTGGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTATCGCATTTCGCTACATTCTTCATCG
ATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTGTGGATTAAATATATTTGCAATACAGGGGACG